Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq14 381 6e-101
>seq14
Length=1659880
Score = 381 bits (422), Expect = 6e-101
Identities = 631/896 (70%), Gaps = 31/896 (3%)
Strand=Plus/Plus
Query 13580 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13639
||||||||| ||| |||||||||||||||||| || ||||| ||| ||| || || ||
Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508
Query 13640 TTCCATAAAATCAAATGGATTT-----ATTGACATAAACACTTTATCACAACCTAGTTCT 13694
|||||||||||||||||| || |||| ||| ||| || ||| | | |
Sbjct 312509 TTCCATAAAATCAAATGGGTTGGAAACATTGTAATA-----TTTTTCGTTACCCAATGCA 312563
Query 13695 AATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCT 13754
| | |||||||||||||| ||| || | ||||||| ||| ||| || |||||| |||
Sbjct 312564 ACCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCT 312623
Query 13755 ATTAGTTTTACAGGAATTATATTGGTTAAAAAT-TCTTTTT-CTATAGACACAGCCTCTT 13812
| | |||||| | | || || ||||| ||||||| | ||||| || || ||
Sbjct 312624 AACAAAGATACAGGTAGTGCATC--TTCAAAATATCTTTTTTCAATAGAAACTGCTTCAG 312681
Query 13813 TTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAA 13870
| || || || | ||| | || || | | |||| | ||||| || | ||
Sbjct 312682 TAATGATTCTTTCAGCAATTT--TTGGATCAGGTTTGTTTTCCAAATGTTGGAATAATAG 312739
Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930
||| |||||||| ||| || || |||||||||| ||| | ||| |||||||| |||||
Sbjct 312740 ACATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAA 312799
Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAA 13990
||||||||||| || ||| || |||||||| ||||||||||| || || ||||||||
Sbjct 312800 ACCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAA 312859
Query 13991 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCG 14049
| || || || |||||||| || | |||| ||| |||| ||| | || || | |
Sbjct 312860 AACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTG 312919
Query 14050 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14109
| |||||| | |||||||||| | |||| ||| || | ||||||||||| ||||
Sbjct 312920 A-ATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCAT 312978
Query 14110 TAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAAT---AAGTAAGCTAT 14166
| |||||| | || | ||||| | | | || || |||||||| |||| | ||
Sbjct 312979 TGAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGA---AT 313035
Query 14167 ACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG 14226
| ||||| ||| ||||||||||| || ||||| || ||||| ||| | ||||| |
Sbjct 313036 AAGTTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAG 313095
Query 14227 ACCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285
||| ||||| | | |||||| |||| |||||||||||||||| || |||||| |
Sbjct 313096 GAATTTGCACTTCTGCACTAAAAT-TTTCAACCAAATTTTCATTAACAATTCCATCAGAA 313154
Query 14286 GCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTGAGTTTT 14342
|||||||||||||| || | | |||| ||| | || | | |||||| | ||
Sbjct 313155 GCTGCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGTTA 313214
Query 14343 TTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACA 14402
||||||||| ||||| || || ||||| | ||| || | ||||||||| ||| |
Sbjct 313215 TTCCAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCT 313274
Query 14403 GCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14458
|| |||||| | ||| ||||| | |||| || ||||| | ||||||||
Sbjct 313275 GCACGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCT 313330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727898057800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |