Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq14 381 6e-101 >seq14 Length=1659880 Score = 381 bits (422), Expect = 6e-101 Identities = 631/896 (70%), Gaps = 31/896 (3%) Strand=Plus/Plus Query 13580 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13639 ||||||||| ||| |||||||||||||||||| || ||||| ||| ||| || || || Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508 Query 13640 TTCCATAAAATCAAATGGATTT-----ATTGACATAAACACTTTATCACAACCTAGTTCT 13694 |||||||||||||||||| || |||| ||| ||| || ||| | | | Sbjct 312509 TTCCATAAAATCAAATGGGTTGGAAACATTGTAATA-----TTTTTCGTTACCCAATGCA 312563 Query 13695 AATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCT 13754 | | |||||||||||||| ||| || | ||||||| ||| ||| || |||||| ||| Sbjct 312564 ACCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCT 312623 Query 13755 ATTAGTTTTACAGGAATTATATTGGTTAAAAAT-TCTTTTT-CTATAGACACAGCCTCTT 13812 | | |||||| | | || || ||||| ||||||| | ||||| || || || Sbjct 312624 AACAAAGATACAGGTAGTGCATC--TTCAAAATATCTTTTTTCAATAGAAACTGCTTCAG 312681 Query 13813 TTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAA 13870 | || || || | ||| | || || | | |||| | ||||| || | || Sbjct 312682 TAATGATTCTTTCAGCAATTT--TTGGATCAGGTTTGTTTTCCAAATGTTGGAATAATAG 312739 Query 13871 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13930 ||| |||||||| ||| || || |||||||||| ||| | ||| |||||||| ||||| Sbjct 312740 ACATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAA 312799 Query 13931 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAA 13990 ||||||||||| || ||| || |||||||| ||||||||||| || || |||||||| Sbjct 312800 ACCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAA 312859 Query 13991 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCG 14049 | || || || |||||||| || | |||| ||| |||| ||| | || || | | Sbjct 312860 AACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTG 312919 Query 14050 ATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCAT 14109 | |||||| | |||||||||| | |||| ||| || | ||||||||||| |||| Sbjct 312920 A-ATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCAT 312978 Query 14110 TAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAAT---AAGTAAGCTAT 14166 | |||||| | || | ||||| | | | || || |||||||| |||| | || Sbjct 312979 TGAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGA---AT 313035 Query 14167 ACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG 14226 | ||||| ||| ||||||||||| || ||||| || ||||| ||| | ||||| | Sbjct 313036 AAGTTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAG 313095 Query 14227 ACCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285 ||| ||||| | | |||||| |||| |||||||||||||||| || |||||| | Sbjct 313096 GAATTTGCACTTCTGCACTAAAAT-TTTCAACCAAATTTTCATTAACAATTCCATCAGAA 313154 Query 14286 GCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTGAGTTTT 14342 |||||||||||||| || | | |||| ||| | || | | |||||| | || Sbjct 313155 GCTGCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGTTA 313214 Query 14343 TTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACA 14402 ||||||||| ||||| || || ||||| | ||| || | ||||||||| ||| | Sbjct 313215 TTCCAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCT 313274 Query 14403 GCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14458 || |||||| | ||| ||||| | |||| || ||||| | |||||||| Sbjct 313275 GCACGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCT 313330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727898057800