Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq14 372 3e-98 >seq14 Length=1659880 Score = 372 bits (412), Expect = 3e-98 Identities = 630/894 (70%), Gaps = 25/894 (3%) Strand=Plus/Plus Query 13368 TTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATT 13427 ||||||||| ||| ||||||||||||||| || || ||||| ||| ||| || || || Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508 Query 13428 TTCCATAAAATCGAATGGATTTGTTGACATA--AACACTTTATCACAACCTAGTTCTAAT 13485 |||||||||||| ||||| || | |||| || | ||| || ||| | | | | Sbjct 312509 TTCCATAAAATCAAATGGGTTGGAA-ACATTGTAATATTTT-TCGTTACCCAATGCAACC 312566 Query 13486 AATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATT 13545 |||||||||||||||| ||| || | ||||||| ||| ||| || |||||| |||| Sbjct 312567 AATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAAC 312626 Query 13546 AGTTTTACAGGAATTATATTAGTTAAAAAT-TCTTTTT-CTATAGACACAGCCTCGTTTA 13603 | |||||| | | || || ||||| ||||||| | ||||| || || || | | Sbjct 312627 AAAGATACAGGTAGTGCATC--TTCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAA 312684 Query 13604 TAATAATCTTAATAATGTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACA 13661 | || | | | ||| | || || | | |||| | ||||| || | || ||| Sbjct 312685 TGATTCTTTCAGCAATTT--TTGGATCAGGTTTGTTTTCCAAATGTTGGAATAATAGACA 312742 Query 13662 CGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCC 13721 |||||||| ||| || || |||||||||| ||| | ||| |||||||| ||||| || Sbjct 312743 TGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACC 312802 Query 13722 TGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATAT 13781 ||||||||| || ||| || |||||||| |||||||| || ||||| |||||||| | Sbjct 312803 TGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAAAC 312862 Query 13782 TCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATA 13840 || || || |||||||| || | | || ||| |||| ||| | || || |||| | Sbjct 312863 ACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTGA-A 312921 Query 13841 TCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGA 13900 ||||| | |||||||||| | |||| ||| || | |||||||| || ||||||| Sbjct 312922 TCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATTGA 312981 Query 13901 ATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAAT---AAGTAAGCTATACA 13957 ||||| || | ||||| | | | || || |||||||| |||| | ||| Sbjct 312982 ATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGA---ATAAG 313038 Query 13958 TTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14017 ||||| ||| |||||||| || || ||||| || ||||||||| | ||||| | Sbjct 313039 TTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGAA 313098 Query 14018 ATTGTACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCT 14076 ||| || || | | |||||| |||| |||| |||||||||||||| |||||| |||| Sbjct 313099 TTTGCACTTCTGCACTAAAAT-TTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCT 313157 Query 14077 GCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTGAGTTTTTTC 14133 ||||||||||| || | | |||| ||| | || | | |||||| | || ||| Sbjct 313158 GCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTC 313217 Query 14134 CAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCT 14193 |||||| ||||| || || ||||| | ||| || | ||||||||| ||| | || Sbjct 313218 CAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGCA 313277 Query 14194 TTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTT 14247 |||||| | ||| ||||| | |||| || ||||| | ||||||||| Sbjct 313278 CGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCTT 313331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588698299880