Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq14 372 3e-98
>seq14
Length=1659880
Score = 372 bits (412), Expect = 3e-98
Identities = 630/894 (70%), Gaps = 25/894 (3%)
Strand=Plus/Plus
Query 13368 TTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATT 13427
||||||||| ||| ||||||||||||||| || || ||||| ||| ||| || || ||
Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508
Query 13428 TTCCATAAAATCGAATGGATTTGTTGACATA--AACACTTTATCACAACCTAGTTCTAAT 13485
|||||||||||| ||||| || | |||| || | ||| || ||| | | | |
Sbjct 312509 TTCCATAAAATCAAATGGGTTGGAA-ACATTGTAATATTTT-TCGTTACCCAATGCAACC 312566
Query 13486 AATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATT 13545
|||||||||||||||| ||| || | ||||||| ||| ||| || |||||| ||||
Sbjct 312567 AATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAAC 312626
Query 13546 AGTTTTACAGGAATTATATTAGTTAAAAAT-TCTTTTT-CTATAGACACAGCCTCGTTTA 13603
| |||||| | | || || ||||| ||||||| | ||||| || || || | |
Sbjct 312627 AAAGATACAGGTAGTGCATC--TTCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAA 312684
Query 13604 TAATAATCTTAATAATGTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACA 13661
| || | | | ||| | || || | | |||| | ||||| || | || |||
Sbjct 312685 TGATTCTTTCAGCAATTT--TTGGATCAGGTTTGTTTTCCAAATGTTGGAATAATAGACA 312742
Query 13662 CGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCC 13721
|||||||| ||| || || |||||||||| ||| | ||| |||||||| ||||| ||
Sbjct 312743 TGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACC 312802
Query 13722 TGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATAT 13781
||||||||| || ||| || |||||||| |||||||| || ||||| |||||||| |
Sbjct 312803 TGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAAAC 312862
Query 13782 TCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT-TTGATA 13840
|| || || |||||||| || | | || ||| |||| ||| | || || |||| |
Sbjct 312863 ACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTGA-A 312921
Query 13841 TCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGA 13900
||||| | |||||||||| | |||| ||| || | |||||||| || |||||||
Sbjct 312922 TCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATTGA 312981
Query 13901 ATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAAT---AAGTAAGCTATACA 13957
||||| || | ||||| | | | || || |||||||| |||| | |||
Sbjct 312982 ATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGA---ATAAG 313038
Query 13958 TTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14017
||||| ||| |||||||| || || ||||| || ||||||||| | ||||| |
Sbjct 313039 TTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGAA 313098
Query 14018 ATTGTACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCT 14076
||| || || | | |||||| |||| |||| |||||||||||||| |||||| ||||
Sbjct 313099 TTTGCACTTCTGCACTAAAAT-TTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCT 313157
Query 14077 GCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTGAGTTTTTTC 14133
||||||||||| || | | |||| ||| | || | | |||||| | || |||
Sbjct 313158 GCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTC 313217
Query 14134 CAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCT 14193
|||||| ||||| || || ||||| | ||| || | ||||||||| ||| | ||
Sbjct 313218 CAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGCA 313277
Query 14194 TTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTT 14247
|||||| | ||| ||||| | |||| || ||||| | |||||||||
Sbjct 313278 CGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCTT 313331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478588698299880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |