Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq16 361 7e-95 seq14 351 1e-91 >seq16 Length=1651669 Score = 361 bits (400), Expect = 7e-95 Identities = 881/1322 (67%), Gaps = 24/1322 (2%) Strand=Plus/Minus Query 71695 AAGGCAACAGATGCCAGATTACAAACGGC---TACCTCATTAGCATCGGCATATTGTATA 71751 || |||| || |||| |||||||| || | | |||||| || | ||||| | | Sbjct 930402 AAAGCAATGGAAGCCAAGTTACAAACTGCAGTTTCGTCATTATCA---GAATATTCCACA 930346 Query 71752 ATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 71811 |||||| || | ||| | ||||||||||| || |||| ||| || |||||| Sbjct 930345 ATTTCACAACACAAATTGGATGATTTGATGGTTCCCAAGTTTTTTTGGTTGGATTTTTTG 930286 Query 71812 TTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATC 71871 ||||| ||||| || |||| |||||| || ||||| ||||| | || | ||| | ||| Sbjct 930285 TTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTTCTGTTTGTGCTTCCAAAATG 930226 Query 71872 GCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTT--CGTATT 71929 || | ||| | | |||| || ||| | || | || ||||| |||| | |||| Sbjct 930225 GCATACCATAATTTTTGAGCTTTAATTGTTTT--TCTACCTCTTCCTTCTTGAACATATT 930168 Query 71930 GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCG 71989 | |||||| ||| || || | || || ||| || |||||| |||| | | Sbjct 930167 TGTTGTATAATTTTTCAAAATCTTTACCATAAACATCACTCAAACCAGGAGCTTCACTTG 930108 Query 71990 GACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCC 72049 || | | |||| ||| ||| || || || ||| || |||||| | ||| |||| || Sbjct 930107 GAGAAAATAATGTCCAATCTGAATTTTCTTTAACTTTTTGCATAAATAAATCTGGAACCC 930048 Query 72050 AAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGAT 72109 | | || ||| | |||||| | |||| || || || || ||| || || || Sbjct 930047 ACAAGGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTTTACCATGATTTTTCCGAATAT 929988 Query 72110 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCC 72169 | | || | | ||||||| |||||| ||||| || || | || | | | || || | Sbjct 929987 CAATAAAATCAAAAATATCACTATGCCATGGTTCTAAATAAAGAGCAAAAGCACCAGGTC 929928 Query 72170 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 72229 ||| || || || ||||| | ||||| || || ||||| ||||||| | |||||||| Sbjct 929927 TTTTATTACCACCTTGATCAACATATCTTGCAGTATTATTGAAAACTCTAATCATTGGAA 929868 Query 72230 TAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGC 72289 | | ||||| || | || || || || | ||||| || | | | |||||| Sbjct 929867 TCAATCCATTAGAAGTTCCGTTTGTTCCAGCAATATATGAACCTGTTGATCTAATATTAT 929808 Query 72290 TAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 72348 ||| ||| ||||| ||||| || || ||||||| || || || ||| |||||| || Sbjct 929807 GAATATGA-AGACCAATTCCACCAGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTG 929749 Query 72349 TCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG 72408 ||||| || || || || |||||| |||| || |||||||| ||||||||| Sbjct 929748 TCATAAATTCCATCAATTGAATCATCTTTCATAGCAACAAGAAAACATGAAGACATTTGT 929689 Query 72409 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 72468 | | ||| || ||||| ||||| || |||||||| || || || || || ||| Sbjct 929688 GGTCTTGGAGTACCTGCATTGAATAATGTTGGAGAAGCATGAGTGAAATATCTTAATGAC 929629 Query 72469 AGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTG--ATGTATTCCTACCGCGA 72526 | | ||| || || || | | || || ||||| ||| ||| ||||| || || | Sbjct 929628 ATCAAATTATAAGTTTCCAAAACTTTYTCAATATC--ATTACCATGAATTCCAACAGCAA 929571 Query 72527 CACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGG 72586 | | ||| | || ||| || ||||||||| | || | | ||| ||| | || || || | Sbjct 929570 CTCTCATAATCAAATGTTGTGGTCTTTCAGCAATTTGGCCATTGATTCTTAATAAATAAG 929511 Query 72587 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 72646 || |||| |||||||||||||||||||| |||||| ||| |||| || |||| |||| Sbjct 929510 ATCTTTCTAAAGTTTTAAAACCAAAATAATTGTATTGAAAATCTCTATCATAAACAATAG 929451 Query 72647 CCGAATTGAGTTTATCCTTATATTTGTTAACTATAT--CCATGGTGAT-ACTTGAAATAA 72703 | ||| | | ||| |||| ||| | ||| || | | || || ||| ||| | Sbjct 929450 CACTATTTAATACATCTTTATTTTTTTCAACAATTTGATAAACGTCATCACT---AATCA 929394 Query 72704 TCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCAC 72763 | ||||| | | |||||||| ||||| ||| ||||||| || |||| | Sbjct 929393 TTGGAGATTTTAATCCATTTTTTTCATTAATATAAAAATATAAATCAGAAATAACTTGAG 929334 Query 72764 TAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGG 72823 |||| ||||||| |||| || |||| ||| || | || ||||| || || | | | Sbjct 929333 AAAATTGTTTTTTAGTTTGTTTATGTAAATTGGAAATTGCAATTCTTGCAGCCAATGTTG 929274 Query 72824 CATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATT 72883 ||||||| ||||| ||||| | || | |||| || |||| | | ||||||| Sbjct 929273 CATAATCAGGATGAATAGTAGTCATATAAGCACATGTTTCAGCAGCCAAATTATCCAATT 929214 Query 72884 CTACCGTTGTTACTCCATTATATATTCCTTGGAT-AACCTTCATAGCTATTTTAATAGGA 72942 | | || || || || | ||| | || || | ||| | | || || |||| Sbjct 929213 CAATAGTAGTAACCCCTTCATAAACACCAGAAATGATTCTTTGT-GTAATAGAAACAGGA 929155 Query 72943 TCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACGAGACGTGATTTTATCA 73002 || ||||| | | | || |||||||||||| | || | ||| |||||||||||| Sbjct 929154 TCAATATGGTTTGGATCCAAACCATAACATAATCTGGCTATTCTAGAAGTGATTTTATCA 929095 Query 73003 AA 73004 || Sbjct 929094 AA 929093 >seq14 Length=1659880 Score = 351 bits (388), Expect = 1e-91 Identities = 629/908 (69%), Gaps = 22/908 (2%) Strand=Plus/Plus Query 41755 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTT 41814 || || ||| || || |||||| || ||| || | |||||| || ||||| || || Sbjct 312431 TTTAGCCATGACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTT 312490 Query 41815 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAA-Attttt- 41872 |||| |||| || || |||||||| |||||||| || |||| |||||| ||| |||||| Sbjct 312491 TCCTGCCAAAGAGATGTTTTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTC 312550 Query 41873 -ttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCAT 41931 ||| |||||| || | |||||||| || | ||||| | |||| ||||||| Sbjct 312551 GTTA---CCCAATGCAACCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAA 312607 Query 41932 TTCACAATTCATTCCTAT--AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 41989 || ||||||||||| ||| | || || || || | || | || || |||| Sbjct 312608 AGCAGCATTCATTCCTAACAAAGAT--ACAGGTAGTGCATCTTCAAAATATCTTTTTTCA 312665 Query 41990 ATAGAGACCGCGTCTGTTATAATAGATCTTACTGT--TTCTTCACTC-GGTGGATACAAT 42046 ||||| || || || || || || |||| | | || || || ||| | Sbjct 312666 ATAGAAACTGCTTCAGTAATGAT---TCTTTCAGCAATTTTTGGATCAGGTTTGTTTTCC 312722 Query 42047 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAAT 42106 ||||||| || | | |||||| |||||| ||||| || |||||||||| ||| ||| Sbjct 312723 AAATGTTGGAATAATAGACATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAAT 312782 Query 42107 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA 42166 || || ||||| || | || ||||| | || || || | |||||| || | ||| Sbjct 312783 TCATTTGAAAAAGTTAAACCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCA 312842 Query 42167 AATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 42226 || |||||||||||||| | ||||| || || ||||| || | | ||| || || || Sbjct 312843 AAGGATCCAGAAAAGAAAACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAA 312902 Query 42227 CCGGCA-CT--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 42283 ||| || ||| || ||||| | |||||| || ||||| | ||| | ||| Sbjct 312903 AGTGCATCTTCGTCTTGAATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGA 312962 Query 42284 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCG 42343 || ||||| |||||||| || | | | | |||| || |||||| | ||| ||||| Sbjct 312963 ATTGTTTCAATGGCATTGAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCA 313022 Query 42344 ATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 42403 |||||||| ||| |||| ||||||||||| || || ||||||||||| ||| Sbjct 313023 ATCAAAAGTGAATAAGTTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAA 313082 Query 42404 CATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACT 42463 ||| |||| || | || || ||||||| || ||| |||| | |||||||| || || Sbjct 313083 CATTTGGCTTCAGGAATTTGCACTTCTGCACTAAAATTTTCAACCAAATTTTCATTAACA 313142 Query 42464 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTC---GTCC 42520 ||||| ||| ||||||||||| || || || | || ||| || |||| || Sbjct 313143 ATTCCATCAGAAGCTGCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCA 313202 Query 42521 GGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAA 42580 || ||||||||||| | | |||||| |||| ||| | ||||||| | |||||| Sbjct 313203 TTCATTCTGTTATTCCAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAA 313262 Query 42581 AATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATA 42640 || || |||||||| |||||| | ||| || |||||||||| ||||| || | | Sbjct 313263 AAAGAAGCTTCTGCACGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAA 313322 Query 42641 ACAAATCT 42648 |||||||| Sbjct 313323 ACAAATCT 313330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139057382920