Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq14 109 8e-19 seq16 87.8 3e-12 >seq14 Length=1659880 Score = 109 bits (120), Expect = 8e-19 Identities = 343/520 (66%), Gaps = 10/520 (2%) Strand=Plus/Minus Query 124983 AGTAGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCT 125042 || |||||| ||||||| |||| |||||||| |||||| || || ||| || Sbjct 313333 AGAAGATTTGTTTTGTTTCCAATCAAATATCATGAAATTTGGCAAGCTTATAAACGTGCA 313274 Query 125043 CAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAG 125102 | || || |||||||| | ||||| | ||||| ||||| || || |||||||| | Sbjct 313273 GAAGCTTCTTTTTGGACTGCAGAAGAAATTGATCTATCCAAAGATTTGCACGATTGGAAT 313214 Query 125103 ACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACA-TTTTGGCCTTCTTTGCCGG 125161 | | ||| ||||| ||| || || || | | | | |||| || || ||||| | Sbjct 313213 AACAGAATGAATGAAAATGAAAGATTTTTCAT-TAGTAGAGTTTTAGCATTTTTTGCAGC 313155 Query 125162 CTCCGATGGAATCGTCAACGACAATCTG-TTGACACGATTCTC-TCAAGAGTTGACCATT 125219 || |||||||| || || || ||| || |||| | ||| | | ||| || ||| Sbjct 313154 TTCTGATGGAATTGTTAATGAAAATTTGGTTGAAA--ATTTTAGTGCAGAAGTGCAAATT 313097 Query 125220 CCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATG 125279 || || | || ||||||||||| ||||| ||||| || ||| | ||| |||| Sbjct 313096 CCTGAAGCCAAATGTTTTTACGGATTTCAAATTATGATGGAAAACATTCACAGTGAAACT 313037 Query 125280 TACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAA 125338 || || ||||||| | || || ||||| || | || | | | | || || Sbjct 313036 TATTCACTTTTGATTGATACTTATATCAAAGATCC-AAAAGAAAGCGATTTTTTATTCAA 312978 Query 125339 CGCAATCGACACGGTGCCGTCTATACGTA-AAAAGGCTCAATGGGTGATTCGGTGGATCG 125397 || || || || | || || | | | ||||||| |||||| ||| | ||||| Sbjct 312977 TGCCATTGAAACAATTCC-TCAAATCAAAGAAAAGGCAGAATGGGCTATTAGATGGATTC 312919 Query 125398 ATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCT 125457 | ||||| | | | || || ||| |||||||||| || || || || || | | Sbjct 312918 AAGACGAAGATGCACTTTTTGCTGAAAGATTGGTGGCATTTGCTGCTGTGGAAGGTGTTT 312859 Query 125458 TCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAA 125497 ||||||| || ||||| || ||||||||| | ||||| Sbjct 312858 TCTTTTCTGGATCCTTTGCTGCAATCTTTTGGTTGAAGAA 312819 >seq16 Length=1651669 Score = 87.8 bits (96), Expect = 3e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 97776 GGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGTTT 97835 ||||| |||||||| ||||| |||| || ||||| |||||| | ||||| ||| | || Sbjct 930839 GGTTTAAGAAACTCATTGCTATTGGCTCCTATGCCAACGGCTTCAACTTCGCAAATCTTG 930898 Query 97836 GGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGTCT 97895 || | ||||| ||| ||||| || || |||||||||||| ||| | || |||| Sbjct 930899 GGTTACAATGAATGTTTCGAACCATTTACTTCAAACATGTACTCTAGAAGAACTTTGTCT 930958 Query 97896 GGAGAGTTTCAATTGACCAACGTGCACTTGGTTCGAGACTTGG 97938 || || || ||| | ||| ||||| || |||| |||| Sbjct 930959 GGGGAATTCCAAATTGTGAACCCATACTTGCTTAGAGATTTGG 931001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059042524920