Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq14 109 8e-19
seq16 87.8 3e-12
>seq14
Length=1659880
Score = 109 bits (120), Expect = 8e-19
Identities = 343/520 (66%), Gaps = 10/520 (2%)
Strand=Plus/Minus
Query 124983 AGTAGATTTACCCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCT 125042
|| |||||| ||||||| |||| |||||||| |||||| || || ||| ||
Sbjct 313333 AGAAGATTTGTTTTGTTTCCAATCAAATATCATGAAATTTGGCAAGCTTATAAACGTGCA 313274
Query 125043 CAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAG 125102
| || || |||||||| | ||||| | ||||| ||||| || || |||||||| |
Sbjct 313273 GAAGCTTCTTTTTGGACTGCAGAAGAAATTGATCTATCCAAAGATTTGCACGATTGGAAT 313214
Query 125103 ACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACA-TTTTGGCCTTCTTTGCCGG 125161
| | ||| ||||| ||| || || || | | | | |||| || || ||||| |
Sbjct 313213 AACAGAATGAATGAAAATGAAAGATTTTTCAT-TAGTAGAGTTTTAGCATTTTTTGCAGC 313155
Query 125162 CTCCGATGGAATCGTCAACGACAATCTG-TTGACACGATTCTC-TCAAGAGTTGACCATT 125219
|| |||||||| || || || ||| || |||| | ||| | | ||| || |||
Sbjct 313154 TTCTGATGGAATTGTTAATGAAAATTTGGTTGAAA--ATTTTAGTGCAGAAGTGCAAATT 313097
Query 125220 CCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATG 125279
|| || | || ||||||||||| ||||| ||||| || ||| | ||| ||||
Sbjct 313096 CCTGAAGCCAAATGTTTTTACGGATTTCAAATTATGATGGAAAACATTCACAGTGAAACT 313037
Query 125280 TACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC-ACATGCTCTTTAA 125338
|| || ||||||| | || || ||||| || | || | | | | || ||
Sbjct 313036 TATTCACTTTTGATTGATACTTATATCAAAGATCC-AAAAGAAAGCGATTTTTTATTCAA 312978
Query 125339 CGCAATCGACACGGTGCCGTCTATACGTA-AAAAGGCTCAATGGGTGATTCGGTGGATCG 125397
|| || || || | || || | | | ||||||| |||||| ||| | |||||
Sbjct 312977 TGCCATTGAAACAATTCC-TCAAATCAAAGAAAAGGCAGAATGGGCTATTAGATGGATTC 312919
Query 125398 ATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCT 125457
| ||||| | | | || || ||| |||||||||| || || || || || | |
Sbjct 312918 AAGACGAAGATGCACTTTTTGCTGAAAGATTGGTGGCATTTGCTGCTGTGGAAGGTGTTT 312859
Query 125458 TCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAA 125497
||||||| || ||||| || ||||||||| | |||||
Sbjct 312858 TCTTTTCTGGATCCTTTGCTGCAATCTTTTGGTTGAAGAA 312819
>seq16
Length=1651669
Score = 87.8 bits (96), Expect = 3e-12
Identities = 117/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 97776 GGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGTTT 97835
||||| |||||||| ||||| |||| || ||||| |||||| | ||||| ||| | ||
Sbjct 930839 GGTTTAAGAAACTCATTGCTATTGGCTCCTATGCCAACGGCTTCAACTTCGCAAATCTTG 930898
Query 97836 GGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGTCT 97895
|| | ||||| ||| ||||| || || |||||||||||| ||| | || ||||
Sbjct 930899 GGTTACAATGAATGTTTCGAACCATTTACTTCAAACATGTACTCTAGAAGAACTTTGTCT 930958
Query 97896 GGAGAGTTTCAATTGACCAACGTGCACTTGGTTCGAGACTTGG 97938
|| || || ||| | ||| ||||| || |||| ||||
Sbjct 930959 GGGGAATTCCAAATTGTGAACCCATACTTGCTTAGAGATTTGG 931001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059042524920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |