Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq17 105 4e-18
seq15 89.7 3e-13
>seq17
Length=834807
Score = 105 bits (116), Expect = 4e-18
Identities = 165/235 (70%), Gaps = 6/235 (3%)
Strand=Plus/Minus
Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200
|||| ||||| || | ||| |||||||| | || || |||||||| || ||||| ||||
Sbjct 25749 CACCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAG 25690
Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260
||||| | || |||||||| || ||| ||| || || | ||| ||||| | |
Sbjct 25689 ACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 25630
Query 33261 GTATGCCTTCTTTTTC---GCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTT 33317
| || |||||||| || | | | || ||| || | | ||| ||||| | ||
Sbjct 25629 GAATACCTTCTTTGTCTTGGATTTTGGC---TTTGACATTGTCAATAGTGTCAGAAGATT 25573
Query 33318 GAACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTT 33372
||| |||| || || ||||| || || | |||||| |||||||||||||| ||
Sbjct 25572 CAACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTT 25518
>seq15
Length=1932387
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200
|||| ||||| || | ||| || ||||| | || ||||| ||||| || ||||| || |
Sbjct 1577103 CACCACCTCTCAATCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCG 1577044
Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260
||||| | ||| ||||| || || ||| ||| || || | ||| ||||| | |
Sbjct 1577043 ACAAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 1576984
Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320
| || |||||||| || ||| || || | | |||||||| || | |
Sbjct 1576983 GAATCCCTTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGA 1576924
Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
| |||| ||| || ||||| || || | ||||| ||||||||||||||
Sbjct 1576923 CTTCCAAAGTGATGGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318777533953266
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |