Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq14 279 4e-70
>seq14
Length=1659880
Score = 279 bits (308), Expect = 4e-70
Identities = 613/896 (68%), Gaps = 27/896 (3%)
Strand=Plus/Plus
Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918
||||||||| || ||||||||||||||| || |||||||||||| | || || || ||
Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508
Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGT-ATTTTTTAC---ACCCTAATTCTA 12974
|||||||||||| || || || ||| || || || |||| | |||| ||| | |
Sbjct 312509 TTCCATAAAATCAAATGG---GTTGGAAACATTGTAATATTTTTCGTTACCC-AATGCAA 312564
Query 12975 GTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTA 13034
|| ||||| ||||||||||| || | || || ||||| ||| || ||||||||||
Sbjct 312565 CCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTA 312624
Query 13035 TTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAA 13094
|| |||||| | || ||| ||| | ||||||| ||| ||||||||| |||
Sbjct 312625 ACAAAGATACAGGTAGTGCATCTTCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAA 312684
Query 13095 CTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----AGATGCTTAAACATCATA 13150
|| ||| | | | || | | ||| |||| | | ||| | || | | |
Sbjct 312685 TGAT-TCTTTCAGCAATTTTTGGA--TCAGG-TTTGTTTTCCAAATGTTGGAATAATAGA 312740
Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210
||||||||||| |||| |||||||||||||| || | || |||||||| |||| |
Sbjct 312741 CATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAA 312800
Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaT 13270
|| ||||| | ||| ||| || | |||||| || |||||||| || || ||||| ||
Sbjct 312801 CCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAA 312860
Query 13271 ATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCA-CCATACGTACTATTTTTACTCTC 13329
| ||||| || || ||||| || | ||| |||||| | | | || | || || |
Sbjct 312861 ACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGC-ATCTTCGTCTTG 312919
Query 13330 TATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTT 13389
||||| | | ||||| | ||| |||| ||| | || |||| || || ||
Sbjct 312920 AATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATT 312979
Query 13390 AAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACAT 13449
|||||| ||| |||| || ||| ||||||||||| ||||| | ||| |
Sbjct 312980 GAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGAATAAGT 313039
Query 13450 TTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATAC 13509
||| ||||| ||||||||| ||||| || || ||||||||| | || || | |
Sbjct 313040 TTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGAAT 313099
Query 13510 CTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568
|| ||||| | | |||||| |||| | || ||||| ||||| || || ||| ||| |
Sbjct 313100 TTGCACTTCTGCACTAAAAT-TTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCTG 313158
Query 13569 CaaaaaaaGC-AAGTATGTGCTTAATAAAttttttttCGTTTTCTGACA-ACT-TTA-AC 13624
||||||| || || | | | |||| || | |||| ||||| || || ||| |
Sbjct 313159 CAAAAAATGCTAAAACTCTAC-TAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTC 313217
Query 13625 CAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCC 13684
||||| | |||||||| |||| ||| | || || | |||||||||||||| | ||
Sbjct 313218 CAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGCA 313277
Query 13685 TTCTTATACATCAT-CCATATATCCTTATAAACAATGGGAAACACAACGTATCTTC 13739
||||| | | | ||| || || | ||| || ||||||| ||| ||||||
Sbjct 313278 CGTTTATA-AGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCTTC 313332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430982310705834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |