Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq14 279 4e-70 >seq14 Length=1659880 Score = 279 bits (308), Expect = 4e-70 Identities = 613/896 (68%), Gaps = 27/896 (3%) Strand=Plus/Plus Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 ||||||||| || ||||||||||||||| || |||||||||||| | || || || || Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508 Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGT-ATTTTTTAC---ACCCTAATTCTA 12974 |||||||||||| || || || ||| || || || |||| | |||| ||| | | Sbjct 312509 TTCCATAAAATCAAATGG---GTTGGAAACATTGTAATATTTTTCGTTACCC-AATGCAA 312564 Query 12975 GTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTA 13034 || ||||| ||||||||||| || | || || ||||| ||| || |||||||||| Sbjct 312565 CCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTA 312624 Query 13035 TTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAA 13094 || |||||| | || ||| ||| | ||||||| ||| ||||||||| ||| Sbjct 312625 ACAAAGATACAGGTAGTGCATCTTCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAA 312684 Query 13095 CTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGAT----AGATGCTTAAACATCATA 13150 || ||| | | | || | | ||| |||| | | ||| | || | | | Sbjct 312685 TGAT-TCTTTCAGCAATTTTTGGA--TCAGG-TTTGTTTTCCAAATGTTGGAATAATAGA 312740 Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 ||||||||||| |||| |||||||||||||| || | || |||||||| |||| | Sbjct 312741 CATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAA 312800 Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaT 13270 || ||||| | ||| ||| || | |||||| || |||||||| || || ||||| || Sbjct 312801 CCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAA 312860 Query 13271 ATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCA-CCATACGTACTATTTTTACTCTC 13329 | ||||| || || ||||| || | ||| |||||| | | | || | || || | Sbjct 312861 ACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGC-ATCTTCGTCTTG 312919 Query 13330 TATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTT 13389 ||||| | | ||||| | ||| |||| ||| | || |||| || || || Sbjct 312920 AATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATT 312979 Query 13390 AAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACAT 13449 |||||| ||| |||| || ||| ||||||||||| ||||| | ||| | Sbjct 312980 GAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGAATAAGT 313039 Query 13450 TTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATAC 13509 ||| ||||| ||||||||| ||||| || || ||||||||| | || || | | Sbjct 313040 TTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGAAT 313099 Query 13510 CTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAG 13568 || ||||| | | |||||| |||| | || ||||| ||||| || || ||| ||| | Sbjct 313100 TTGCACTTCTGCACTAAAAT-TTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCTG 313158 Query 13569 CaaaaaaaGC-AAGTATGTGCTTAATAAAttttttttCGTTTTCTGACA-ACT-TTA-AC 13624 ||||||| || || | | | |||| || | |||| ||||| || || ||| | Sbjct 313159 CAAAAAATGCTAAAACTCTAC-TAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTC 313217 Query 13625 CAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCC 13684 ||||| | |||||||| |||| ||| | || || | |||||||||||||| | || Sbjct 313218 CAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGCA 313277 Query 13685 TTCTTATACATCAT-CCATATATCCTTATAAACAATGGGAAACACAACGTATCTTC 13739 ||||| | | | ||| || || | ||| || ||||||| ||| |||||| Sbjct 313278 CGTTTATA-AGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCTTC 313332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982310705834