Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq14 237 4e-57
seq2 154 3e-32
>seq14
Length=1659880
Score = 237 bits (262), Expect = 4e-57
Identities = 619/920 (67%), Gaps = 47/920 (5%)
Strand=Plus/Minus
Query 268700 AGATTTGTGATATTTCCAATACAGCATGGTGATATATGG-AGGATGTACAAACAGGCCGT 268758
|||||||| | |||||||| | || ||| || ||| | | | || |||| || |
Sbjct 313330 AGATTTGTTTTGTTTCCAATCAAATATCATGAAATTTGGCAAGCT-TATAAACGTGCAGA 313272
Query 268759 TGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAA 268818
|||||||||||||||| ||||||| | ||||| || | || || |||||||| ||
Sbjct 313271 AGCTTCTTTTTGGACTGCAGAAGAAATTGATCTATCCAAAGATTTGCACGATTGGAATAA 313212
Query 268819 TTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTT-GCGTTTTTTGCAGTTA 268874
|| || | || |||||| || || | || | | || || |||||||||| |
Sbjct 313211 CAGAATGAATGAAAATGAAAGATTTTTCAT-TAGTAGAGTTTTAGCATTTTTTGCAGCTT 313153
Query 268875 GTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTG 268934
|||||| || ||||| |||||| | || || || || || ||| || || |||||||
Sbjct 313152 CTGATGGAATTGTTAATGAAAATTTGGTTGAAAATTTTAGTGCAGAAGTGCAAATTCCTG 313093
Query 268935 AAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGA----TG 268990
|||||| ||||||||||||||| || || || ||||| ||||| ||| || |
Sbjct 313092 AAGCCAAATGTTTTTACGGATTTCAAATTATGATGGAAAACATTCA--CAGTGAAACTTA 313035
Query 268991 TACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCT 269050
| || || || || ||||||||||| | ||| | |||||||| | |||| |
Sbjct 313034 TTCA--CTTTTGATTGATACTTATATCAAAGAT-----CCAAAAGAAAGCGATTTTTTAT 312982
Query 269051 TCTATGAGA-----ACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGA 269105
|| ||| | || || | | | |||| | ||||||||| | | |||||
Sbjct 312981 TCAATGCCATTGAAACAATTCCTCAAATCAAAGAAAAGGCAGAATGGGCTATTAGATGGA 312922
Query 269106 T---AAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTA 269162
| | |||| || | || | ||||| || || || ||||| ||||| ||||||
Sbjct 312921 TTCAAGACGAAGATGCACTTTTTGCTGAAAGATTGGTGGCATTTGCTGCTGTGGAAGGTG 312862
Query 269163 TATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAG 269222
| |||||||| || || ||||| || ||||||||||||||||||| || | |||||||
Sbjct 312861 TTTTCTTTTCTGGATCCTTTGCTGCAATCTTTTGGTTGAAGAAAAAGGGGTTGATGCCAG 312802
Query 269223 GATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTT 269282
| |||||||| || || |||||||| | || || ||||| | || ||| || || |
Sbjct 312801 GTTTAACTTTTTCAAATGAATTGATTTGTAGAGATGAAGGACTGCATACCGATTTTGCAT 312742
Query 269283 GTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAG-TATACGAA--A 269339
|| ||||||| | || || | | |||||||| || | | | | | | ||| |
Sbjct 312741 GTCTATTATT--CCAA-CATTTGGAAAACAAACCTGATCCAAAAATTGCTGAAAGAATCA 312685
Query 269340 TTATAGATTCAGCTGTTTCTGTAG-AAACAGA-ATTTCTAACGGAAGCTCTATCTATCGA 269397
||| || ||| |||||| | | ||| ||| |||| || || || ||| || | |
Sbjct 312684 TTACTGA---AGCAGTTTCTATTGAAAAAAGATATTTTGAA--GATGCACTACCTGT--A 312632
Query 269398 TCTT--ATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGATAGA 269455
|||| | || |||||| | ||||| ||||| | | || || ||||||||
Sbjct 312631 TCTTTGTTAGGAATGAATGCTGCTTTGATGAATCAATATGTGGAATTTGTTGCTGATAGA 312572
Query 269456 TTGCTGGTGTCTTTAGGGTTTAGTAAAA-AATATAACGTTGAAAATCCGTTTAGTTTTAT 269514
|| |||| | || |||| | |||| | || || ||| || || ||| ||||||
Sbjct 312571 TTATTGGTTGCATT-GGGTAACGAAAAATATTACAATGTTTCCAACCCATTTGATTTTAT 312513
Query 269515 GGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTATCA 269574
||| || || || || | ||| || | |||||||| || || | || | | |||||
Sbjct 312512 GGAAAACATCTCTTTGGCAGGAAAAACAAATTTCTTTGAAAAAAGAGTTTCTGATTATCA 312453
Query 269575 GAAAATGGGTGTAATGTCTA 269594
||| ||||| ||| |||
Sbjct 312452 AAAAGCAGGTGTCATGGCTA 312433
>seq2
Length=821690
Score = 154 bits (170), Expect = 3e-32
Identities = 147/188 (78%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| |||||||| ||||| || |||||||| | ||||||||| ||||| | |||||| |||
Sbjct 193835 GTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCA 193776
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || | || ||||| ||||| || || |||||||| || || || || |||||
Sbjct 193775 GCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATTTTGGCTTTG 193716
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| ||| || ||| || ||||| || |||||||||||||| | |||
Sbjct 193715 ACGTTATCGATGGTGTCGGAAGATTCGACTTCTAGGGTGATAGTCTTACCAGTTAAGGTT 193656
Query 104543 TTTACAAA 104550
|| |||||
Sbjct 193655 TTGACAAA 193648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398149211036
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |