Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq15 141 1e-28
seq16 136 5e-27
>seq15
Length=1932387
Score = 141 bits (156), Expect = 1e-28
Identities = 393/595 (66%), Gaps = 22/595 (4%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| ||||| || ||||| | || ||||||| ||| || || ||| ||
Sbjct 1078666 AAATTTGAAGACATGGGTGTTGGTGGTTTGGACAAAGAATTTACTCAAATCTTTAGAAGA 1078607
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517
|||||||| || ||| |||| || | || ||||| || ||| |
Sbjct 1078606 GCATTTGCCTCGAGAATTTTTCCACCAGATGTCATTGCTAAATTGGGGATCTCGCATGTC 1078547
Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577
||||| || | || ||| || |||||| |||||||| || || ||| || |||
Sbjct 1078546 AAAGGTCTTCTTTTGTTTGGTCCACCTGGTACAGGTAAAACTTTGATTGCTAGAAAAATT 1078487
Query 164578 GCT--CAAGCTTTTAAATCGC--GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633
| | || |||| || || || || ||||||||| |||||||||||| | ||||
Sbjct 1078486 GGTACCATGCTT--AATGCGAAGGAACC--TAAAATTGTCAATGGTCCTGAAATTTTGAG 1078431
Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693
|||||| || || || |||| ||| ||||||| |||||| | || || |||| |||
Sbjct 1078430 CAAATACGTTGGGTCTTCTGAAGAAAATATTAGAAATTTGTTTAAAGACGCAGAAGCAGA 1078371
Query 164694 ACA-AAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAGATG 164752
| | |||| || ||| || ||| |||| |||| |||||||||| | |||
Sbjct 1078370 ATACAAAGCAA-AAGGAGAAGAAAGTTCTCTACACATTATCATTTTTGATGAATTGGATT 1078312
Query 164753 CTCTTTGCAA-AAAACGTGGT-----GATAATATTA------TTCATGATGCAGTGGTTA 164800
|| ||| ||| | | | ||| | | || | || ||| || || |
Sbjct 1078311 CTGTTTTCAAGCAGAGGGGGTCTAGAGGTGATGGGACCGGGGTTGGTGACAATGTCGTGA 1078252
Query 164801 ATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGTA 164860
|||| ||| | ||||||| |||||||| || || || || ||||| || | ||||
Sbjct 1078251 ATCAATTGTTGGCTAAAATGGATGGTGTTGATCAGTTGAACAACATTTTGGTTATTGGTA 1078192
Query 164861 TGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTGA 164920
||||||| || ||||| |||||| | || || || |||| ||| |||| || |
Sbjct 1078191 TGACCAATCGTAAAGATTTGATTGATAACGCCTTGTTGAGACCAGGTAGATTTGAGGTTC 1078132
Query 164921 AAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCA 164975
|| | ||||| ||| || || || |||| | || |||||||| || ||||
Sbjct 1078131 AAGTGGAAATCAAATTGCCAGATGAACAAGGTAGGCTACAAATTTTTGAAATTCA 1078077
>seq16
Length=1651669
Score = 136 bits (150), Expect = 5e-27
Identities = 303/450 (67%), Gaps = 25/450 (6%)
Strand=Plus/Minus
Query 6807 TAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATG 6866
|| ||||||||| | ||| | | |||||| ||||| || || || || | || ||
Sbjct 124384 TATTTGTTCTTTCAAAGCGTCAACGTGATCTTTATAAACGTGGGCGTCACCCAAAGTGTG 124325
Query 6867 AATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATA 6926
||| |||||||| || | ||||||| | ||| ||||| | | |||| | ||||||
Sbjct 124324 AATGAATTCACCAGGATCCATATCACAAACTTTGGCAATCATTTTAGTTAGCAGTGCATA 124265
Query 6927 AGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATA----ACAT- 6981
|| || | || || || || ||||| |||||||| |||||||| || |||
Sbjct 124264 GGATGCAATGTTGAATGGGACCCCTAAACCCATATCACAAGATCTTTGGTATAGAACACA 124205
Query 6982 TGACAAGATAAAA-------TATTGTCTATAG---------CATAAAATTGACACAATAC 7025
||| | || | | | ||| ||| |||||||||||| || ||
Sbjct 124204 TGAAAGTTTAGGACGGGCGTTTTCTTCTTTAGGAAAGCTCACATAAAATTGACTGAAAAC 124145
Query 7026 ATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAAT 7085
||| || ||||| ||| | | | | ||| | || ||||||||| ||| | |||
Sbjct 124144 ATGGCAAGGAGGCAAAGCCATTTTTTTGAAATCTGGAGGGTTCCAAGCACTCAAGATAAT 124085
Query 7086 ACGTCTATCATTTGGATTTGTTTTTAATTTTGT-TATAATTATTTGTAATTGATCTATA- 7143
| ||| || | ||| || || ||| | ||||| ||||| | |||||| |||
Sbjct 124084 TCTTCTGTCGTATGGGTT-GTGTTTCAGTTTGTATATAACCTCAGCCAGTTGATC-ATAG 124027
Query 7144 CCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGA 7203
||||| || ||||| || | ||| || | || | |||||||||||||||||||||
Sbjct 124026 CCCTGGCCATCATAGTTGTCGTCACATGTTTTGTATTCTGCTCCAAAATGTCTCCATTGA 123967
Query 7204 AACCCATAAATAGGACCTAAATCACCTTCT 7233
|||||||||| |||||| | ||||||||||
Sbjct 123966 AACCCATAAACAGGACCAAGATCACCTTCT 123937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871873377200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |