Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq15 141 1e-28 seq16 136 5e-27 >seq15 Length=1932387 Score = 141 bits (156), Expect = 1e-28 Identities = 393/595 (66%), Gaps = 22/595 (4%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| ||||| || ||||| | || ||||||| ||| || || ||| || Sbjct 1078666 AAATTTGAAGACATGGGTGTTGGTGGTTTGGACAAAGAATTTACTCAAATCTTTAGAAGA 1078607 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517 |||||||| || ||| |||| || | || ||||| || ||| | Sbjct 1078606 GCATTTGCCTCGAGAATTTTTCCACCAGATGTCATTGCTAAATTGGGGATCTCGCATGTC 1078547 Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577 ||||| || | || ||| || |||||| |||||||| || || ||| || ||| Sbjct 1078546 AAAGGTCTTCTTTTGTTTGGTCCACCTGGTACAGGTAAAACTTTGATTGCTAGAAAAATT 1078487 Query 164578 GCT--CAAGCTTTTAAATCGC--GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633 | | || |||| || || || || ||||||||| |||||||||||| | |||| Sbjct 1078486 GGTACCATGCTT--AATGCGAAGGAACC--TAAAATTGTCAATGGTCCTGAAATTTTGAG 1078431 Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693 |||||| || || || |||| ||| ||||||| |||||| | || || |||| ||| Sbjct 1078430 CAAATACGTTGGGTCTTCTGAAGAAAATATTAGAAATTTGTTTAAAGACGCAGAAGCAGA 1078371 Query 164694 ACA-AAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAGATG 164752 | | |||| || ||| || ||| |||| |||| |||||||||| | ||| Sbjct 1078370 ATACAAAGCAA-AAGGAGAAGAAAGTTCTCTACACATTATCATTTTTGATGAATTGGATT 1078312 Query 164753 CTCTTTGCAA-AAAACGTGGT-----GATAATATTA------TTCATGATGCAGTGGTTA 164800 || ||| ||| | | | ||| | | || | || ||| || || | Sbjct 1078311 CTGTTTTCAAGCAGAGGGGGTCTAGAGGTGATGGGACCGGGGTTGGTGACAATGTCGTGA 1078252 Query 164801 ATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGTA 164860 |||| ||| | ||||||| |||||||| || || || || ||||| || | |||| Sbjct 1078251 ATCAATTGTTGGCTAAAATGGATGGTGTTGATCAGTTGAACAACATTTTGGTTATTGGTA 1078192 Query 164861 TGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTGA 164920 ||||||| || ||||| |||||| | || || || |||| ||| |||| || | Sbjct 1078191 TGACCAATCGTAAAGATTTGATTGATAACGCCTTGTTGAGACCAGGTAGATTTGAGGTTC 1078132 Query 164921 AAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCA 164975 || | ||||| ||| || || || |||| | || |||||||| || |||| Sbjct 1078131 AAGTGGAAATCAAATTGCCAGATGAACAAGGTAGGCTACAAATTTTTGAAATTCA 1078077 >seq16 Length=1651669 Score = 136 bits (150), Expect = 5e-27 Identities = 303/450 (67%), Gaps = 25/450 (6%) Strand=Plus/Minus Query 6807 TAATTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATG 6866 || ||||||||| | ||| | | |||||| ||||| || || || || | || || Sbjct 124384 TATTTGTTCTTTCAAAGCGTCAACGTGATCTTTATAAACGTGGGCGTCACCCAAAGTGTG 124325 Query 6867 AATAAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATA 6926 ||| |||||||| || | ||||||| | ||| ||||| | | |||| | |||||| Sbjct 124324 AATGAATTCACCAGGATCCATATCACAAACTTTGGCAATCATTTTAGTTAGCAGTGCATA 124265 Query 6927 AGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATA----ACAT- 6981 || || | || || || || ||||| |||||||| |||||||| || ||| Sbjct 124264 GGATGCAATGTTGAATGGGACCCCTAAACCCATATCACAAGATCTTTGGTATAGAACACA 124205 Query 6982 TGACAAGATAAAA-------TATTGTCTATAG---------CATAAAATTGACACAATAC 7025 ||| | || | | | ||| ||| |||||||||||| || || Sbjct 124204 TGAAAGTTTAGGACGGGCGTTTTCTTCTTTAGGAAAGCTCACATAAAATTGACTGAAAAC 124145 Query 7026 ATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAAT 7085 ||| || ||||| ||| | | | | ||| | || ||||||||| ||| | ||| Sbjct 124144 ATGGCAAGGAGGCAAAGCCATTTTTTTGAAATCTGGAGGGTTCCAAGCACTCAAGATAAT 124085 Query 7086 ACGTCTATCATTTGGATTTGTTTTTAATTTTGT-TATAATTATTTGTAATTGATCTATA- 7143 | ||| || | ||| || || ||| | ||||| ||||| | |||||| ||| Sbjct 124084 TCTTCTGTCGTATGGGTT-GTGTTTCAGTTTGTATATAACCTCAGCCAGTTGATC-ATAG 124027 Query 7144 CCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGA 7203 ||||| || ||||| || | ||| || | || | ||||||||||||||||||||| Sbjct 124026 CCCTGGCCATCATAGTTGTCGTCACATGTTTTGTATTCTGCTCCAAAATGTCTCCATTGA 123967 Query 7204 AACCCATAAATAGGACCTAAATCACCTTCT 7233 |||||||||| |||||| | |||||||||| Sbjct 123966 AACCCATAAACAGGACCAAGATCACCTTCT 123937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871873377200