Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq15 134 1e-26
seq17 131 2e-25
seq2 123 2e-23
>seq15
Length=1932387
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||||||||| ||| || || || | || || |||||||| | ||| || || |
Sbjct 1577101 CCACCTCTCAATCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGAC 1577042
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| || || |||| |||||| || ||||||| |||||||| || ||||| |||
Sbjct 1577041 AAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 1576982
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| ||||||||||| | || || | ||||||| | ||| ||||| | | |||||
Sbjct 1576981 ATCCCTTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACT 1576922
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| | ||||||||||| ||||| | ||||| || || || |||||
Sbjct 1576921 TCCAAAGTGATGGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875
>seq17
Length=834807
Score = 131 bits (144), Expect = 2e-25
Identities = 171/236 (72%), Gaps = 1/236 (0%)
Strand=Plus/Minus
Query 94772 TTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTA 94831
|||||| | || |||||||||| ||| ||||| || | || ||||| ||||| | |||
Sbjct 25755 TTTTAC-CACCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTG 25697
Query 94832 TAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGA 94891
|| || || ||| | ||| |||| ||||| || ||||||| |||||||| ||
Sbjct 25696 TAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGG 25637
Query 94892 TCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCG 94951
|| || ||||||||||||||||| | ||||| || ||||| | | | ||||||||
Sbjct 25636 TCAGGTGGAATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTGTCAATAGTGTCAGAA 25577
Query 94952 TGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | || |||||||| || || | |||||| || || || |||||
Sbjct 25576 GATTCAACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 25521
>seq2
Length=821690
Score = 123 bits (136), Expect = 2e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 94778 ACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCG 94837
|| || |||||||||| ||| ||||| || | ||| ||||| ||||| | ||| || ||
Sbjct 193868 ACACCACCTCTCAATCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCA 193809
Query 94838 CTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897
|| ||| | ||| |||| ||||| || ||||||| |||||||| || || ||
Sbjct 193808 GACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGT 193749
Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957
||||||||||||||||| | ||||| || |||||| ||| ||||| | |||
Sbjct 193748 GGAATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCG 193689
Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAA 94998
|| || | ||||| || || ||||| | ||||| |||||
Sbjct 193688 ACTTCTAGGGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 193648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291104738120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |