Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq14 311 9e-80
>seq14
Length=1659880
Score = 311 bits (344), Expect = 9e-80
Identities = 604/886 (68%), Gaps = 11/886 (1%)
Strand=Plus/Plus
Query 21184 TTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGA 21243
||||||||||||| |||||||||||| || |||||||| |||||| |||| || ||
Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508
Query 21244 TTCCATAAAATCAAATGGATTTTCAG-ATTTAAATATTTTATTACAACCCAGTTCTGATA 21302
|||||||||||||||||| || | ||| |||||||| | ||||| | | |
Sbjct 312509 TTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTT-TCGTTACCCAATGCAACCA 312567
Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362
|||||||||| || |||||||| | ||||||| ||| || || |||||| || | ||
Sbjct 312568 ATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAACA 312627
Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTT-CTATAGAGACGGCTTCAACAATT 21421
| |||||| || || | | |||||| | ||||| | ||||| || |||||| |||
Sbjct 312628 AAGATACAGGTAGTGCATCT-TCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAATG 312686
Query 21422 ATATTTATTATCC-TAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGC 21480
|| || | | | | || | ||| | || |||| || | | ||||||
Sbjct 312687 ATTCTT-TCAGCAATTTTTGGATCAGGTTTGTTTTCCAAATGTTGGAATAATAGACATGC 312745
Query 21481 AAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGG 21540
|||||| ||||| |||||||| |||| || |||||||| ||||| |||||||| ||
Sbjct 312746 AAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACCTGG 312805
Query 21541 CATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCC 21600
||| || || | || || |||||||| |||| ||||| | ||| |||||||||| ||
Sbjct 312806 CATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAAACACC 312865
Query 21601 CTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCA 21660
|| || ||||||||||| || |||| |||| | | | |||| || |||||
Sbjct 312866 TTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTGAATCCA 312925
Query 21661 TTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAAG 21720
| | ||||||| |||||||||||| || | |||||| ||||| || || || |
Sbjct 312926 TCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATTGAATAA 312985
Query 21721 ATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGA 21780
| || |||| | | ||| | || ||| |||||
Sbjct 312986 AAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGAATAAGTTTCACT 313045
Query 21781 ATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAAC 21840
|| || ||||| ||| || |||||||||||||||||| | || || | | ||| ||
Sbjct 313046 GTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGAATTTGCAC 313105
Query 21841 CTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAA 21899
|| | | |||||| || | |||| |||||||| || ||||||||| || |||||||
Sbjct 313106 TTCTGCACTAAAAT-TTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCTGCAAAAA 313164
Query 21900 ATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAATCTA 21956
|||| || | | | || ||| ||| ||| || || | | | || ||||||||
Sbjct 313165 ATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGT 313224
Query 21957 ATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTAT 22016
|||||||| |||| ||| | |||||| | |||||||| ||| || |||||
Sbjct 313225 GCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGCACGTTTAT 313284
Query 22017 ACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCT 22062
| ||| || |||| |||| | |||||||| | ||||| ||
Sbjct 313285 AAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCT 313330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531900686971080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |