Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq14 311 9e-80 >seq14 Length=1659880 Score = 311 bits (344), Expect = 9e-80 Identities = 604/886 (68%), Gaps = 11/886 (1%) Strand=Plus/Plus Query 21184 TTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGA 21243 ||||||||||||| |||||||||||| || |||||||| |||||| |||| || || Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508 Query 21244 TTCCATAAAATCAAATGGATTTTCAG-ATTTAAATATTTTATTACAACCCAGTTCTGATA 21302 |||||||||||||||||| || | ||| |||||||| | ||||| | | | Sbjct 312509 TTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTT-TCGTTACCCAATGCAACCA 312567 Query 21303 ATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCA 21362 |||||||||| || |||||||| | ||||||| ||| || || |||||| || | || Sbjct 312568 ATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAACA 312627 Query 21363 ATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTT-CTATAGAGACGGCTTCAACAATT 21421 | |||||| || || | | |||||| | ||||| | ||||| || |||||| ||| Sbjct 312628 AAGATACAGGTAGTGCATCT-TCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAATG 312686 Query 21422 ATATTTATTATCC-TAGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGC 21480 || || | | | | || | ||| | || |||| || | | |||||| Sbjct 312687 ATTCTT-TCAGCAATTTTTGGATCAGGTTTGTTTTCCAAATGTTGGAATAATAGACATGC 312745 Query 21481 AAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGG 21540 |||||| ||||| |||||||| |||| || |||||||| ||||| |||||||| || Sbjct 312746 AAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACCTGG 312805 Query 21541 CATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCC 21600 ||| || || | || || |||||||| |||| ||||| | ||| |||||||||| || Sbjct 312806 CATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAAACACC 312865 Query 21601 CTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCA 21660 || || ||||||||||| || |||| |||| | | | |||| || ||||| Sbjct 312866 TTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTGAATCCA 312925 Query 21661 TTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAAAG 21720 | | ||||||| |||||||||||| || | |||||| ||||| || || || | Sbjct 312926 TCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATTGAATAA 312985 Query 21721 ATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGA 21780 | || |||| | | ||| | || ||| ||||| Sbjct 312986 AAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGAATAAGTTTCACT 313045 Query 21781 ATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAAC 21840 || || ||||| ||| || |||||||||||||||||| | || || | | ||| || Sbjct 313046 GTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGAATTTGCAC 313105 Query 21841 CTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAA 21899 || | | |||||| || | |||| |||||||| || ||||||||| || ||||||| Sbjct 313106 TTCTGCACTAAAAT-TTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCTGCAAAAA 313164 Query 21900 ATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAATCTA 21956 |||| || | | | || ||| ||| ||| || || | | | || |||||||| Sbjct 313165 ATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGT 313224 Query 21957 ATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTAT 22016 |||||||| |||| ||| | |||||| | |||||||| ||| || ||||| Sbjct 313225 GCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGCACGTTTAT 313284 Query 22017 ACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCT 22062 | ||| || |||| |||| | |||||||| | ||||| || Sbjct 313285 AAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCT 313330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900686971080