Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq16 412 4e-110 seq14 349 4e-91 >seq16 Length=1651669 Score = 412 bits (456), Expect = 4e-110 Identities = 1458/2253 (65%), Gaps = 68/2253 (3%) Strand=Plus/Minus Query 61991 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 62049 ||||| | ||||| |||| ||| || |||| || || | | |||||||| || |||| Sbjct 931322 CAATGGTAAATTGGATGGCAGCAGAAGCGGCTTGGGTTCTCAAGTAGTACATACCTGTTT 931263 Query 62050 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC- 62107 | | ||| | ||| |||||||||||||| || | ||| || | || | Sbjct 931262 TCAAACCTTTAGACCACCCGTAAAAATGCATGGAGGTCAATTTACCCATGGTTGGGGCCA 931203 Query 62108 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62167 || || || || |||| ||| ||| |||||| || || ||| |||||||||||||| Sbjct 931202 TG--ATGTGAATGTTCAAAGAATGAGATTGATCAATAAAAGCTGATCTGTCTGCAGCCAT 931145 Query 62168 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62226 | ||||| || ||||| | | |||||||| ||||| || || || |||| |||| Sbjct 931144 GTCGATGATGGTTTTTTGCGACAATTCCCAAACGGTTTTGTACAAGTCT-TTAAGTTCTT 931086 Query 62227 CTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 62283 |||| ||||| || ||||| || || | || ||||| | || || Sbjct 931085 GAGGAATGTTTGGCAAATGTTGAATAGACCCGTTGTTAGCAATAATGTTTGATTTCATGG 931026 Query 62284 CATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 62342 |||| | ||| |||| | || ||| ||||||| | | || || || | ||| Sbjct 931025 CATCGTCCCA-AATTCCCAAATCAACCAAATCTCTAAGCAAGTATGGGTTCACAATTTGG 930967 Query 62343 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCA 62402 ||||| |||||||| ||| | || ||| || || ||| | ||||| | | ||| Sbjct 930966 AATTCCCCAGACAAAGTTCTTCTAGAGTACATGTTTGAAGTAAATGGTTCGAAACATTCA 930907 Query 62403 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 62462 || | ||||| ||||| | |||||| || || |||||||| |||| | || ||| Sbjct 930906 TTGTAACCCAAGATTTGCGAAGTTGAAGCCGTTGGCATAGGAGCCAATAGCAATGAGTTT 930847 Query 62463 CTAAGACCGTATGTTC-TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG 62521 || | ||| | | ||| ||||||| ||| | | || |||||| | ||||||||| || || Sbjct 930846 CTTAAACC-TGTTTTCATGATTTTTTCTCTCAAAGATTCCCATTCCCAAAGATCTGATGG 930788 Query 62522 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 62581 | ||| | || || | || |||||| | | | Sbjct 930787 AGCTCTGTTCCACATATCGAATTGCAAAACCCCTTGGGAAGCTGGAGATCCTTGAAACGA 930728 Query 62582 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 62641 | |||||| ||||||| | | || | ||| || || || ||| ||| || | Sbjct 930727 TTGGTATGGACCTTCCTCCACGGCCATTTCGTTGGAAGCTTCCAAAGCAGCGTGGTACAA 930668 Query 62642 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTC--CAGGCTATCAAATGGATAATTT 62699 |||||||| || | | ||||| | || ||||| ||| |||||||||| | Sbjct 930667 TGTTTCGAAAATTTGAATGTTTAGTTGTTTAGCTTCTTCAGA--ATCAAATGGAACTCTC 930610 Query 62700 AAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 62759 || || ||||| | ||| || || |||||||| || | | | || |||||||||||| | Sbjct 930609 AAAAGCATAAAAGTGTCGGCCAAACCTTGAACCCCTAAAGCAATTGGTCTATGTCTCATG 930550 Query 62760 TTAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62816 || ||| || ||| ||| | ||||| || || |||| || | | | || | Sbjct 930549 TTTGAGTTTCTTGCAGTTTCC---ACTGGATAGTAGTTTCTATCAATGACTCTGTTCAAG 930493 Query 62817 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---------TCGC 62867 ||||| || ||||| | || || | || ||| |||| | | | | Sbjct 930492 TTTCTTGTGATGACTTTTGCGACTTCATGCAATTTTTTGAAATTATAAGTTTGAGTTTGG 930433 Query 62868 CCATCTATT---AC-------AAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGC 62917 ||| | || ||| || | ||| ||| || |||| |||||||| || Sbjct 930432 TTRTCTTCTGAAACGTTGATAAAAGCTGGTAAAG-CAATGGAAGCCAAGTTACAAACTGC 930374 Query 62918 ---TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGAT 62974 | | |||||| || | ||||| | || ||| || | ||| | ||||| Sbjct 930373 AGTTTCGTCATTATCA---GAATATTCCACAATTTCACAACACAAATTGGATGATTTGAT 930317 Query 62975 AGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGG 63034 ||||| || |||| ||| || ||||||||||| ||||| || |||| ||| ||||| Sbjct 930316 GGTTCCCAAGTTTTTTTGGTTGGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGG 930257 Query 63035 AGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTAT 63094 ||||| ||||| | || | ||| | ||| || | ||| | | |||| || ||| | Sbjct 930256 TGTACCTGTTTCTGTTTGTGCTTCCAAAATGGCATACCATAATTTTTGAGCTTTAATTGT 930197 Query 63095 AGATTTGTATCTCCTTTCTCTTTCGTATAGTG--TATACAATCGTTCGAACTCGTCTCCC 63152 ||| || ||| | |||| ||| | | || ||| ||| || || | || Sbjct 930196 T--TTTCTACCTCTTCCTTCTTGAACATATTTGTTGTATAATTTTTCAAAATCTTTACCA 930139 Query 63153 CAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 63212 |||||| ||| |||||| |||| ||| | | || | ||| ||| | || Sbjct 930138 TAAACATCACTCAAACCAGGAGCTTCACTTGGAGAAAATAATGTCCAATCTGAATTTTCT 930079 Query 63213 TTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 63272 || ||| || |||||| | ||| |||| ||| | || ||| | |||||| | |||| Sbjct 930078 TTAACTTTTTGCATAAATAAATCTGGAACCCACAAGGCAGGAAACAAATCTCTTGCTCTA 930019 Query 63273 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 63332 ||| || || || ||| || || ||| | || | | ||||||| |||||| Sbjct 930018 ATTTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCAT 929959 Query 63333 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63392 ||||| || || | || | | | ||||| | ||| || || || ||||| | ||||| Sbjct 929958 GGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTT 929899 Query 63393 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCG 63452 || || ||||| ||||||| | ||||||||| | || || || | || || || || Sbjct 929898 GCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTTCCGTTTGTTCCA 929839 Query 63453 GAGATATAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCAT 63511 | ||||| || | | | ||||||| ||| ||| ||||| ||||| || || | Sbjct 929838 GCAATATATGAACCTGTTGATCTAATATTATGAATATGA-AGACCAATTCCACCAGCAGT 929780 Query 63512 TTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGAT 63571 |||||| || || || ||| |||||| |||||||| || || || || |||||| | Sbjct 929779 TTTAGAAATCAAAGCACATTCTTTTAAAGTGTCATAAATTCCATCAATTGAATCATCTTT 929720 Query 63572 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 63631 ||| || |||||||| ||||||||| | | ||| || ||||| ||||| || Sbjct 929719 CATAGCAACAAGAAAACATGAAGACATTTGTGGTCTTGGAGTACCTGCATTGAATAATGT 929660 Query 63632 AGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTC 63691 |||||||| || || || || || || | | ||| || || || | | || || Sbjct 929659 TGGAGAAGCATGAGTGAAATATCTTAATGACATCAAATTATAAGTTTCCAAAACTTTYTC 929600 Query 63692 TATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63749 ||||| ||| ||||||||| || || || | ||| | || || || ||||||||| Sbjct 929599 AATATC--ATTACCATGAATTCCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCA 929542 Query 63750 ACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 63809 | || | | || ||| | || || || ||| |||| |||||||||||||||||||| Sbjct 929541 GCAATTTGGCCATTGATTCTTAATAAATAAGATCTTTCTAAAGTTTTAAAACCAAAATAA 929482 Query 63810 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTA 63869 |||||| ||| |||| || |||| |||| | || | | ||| |||| ||| | | Sbjct 929481 TTGTATTGAAAATCTCTATCATAAACAATAGCACTATTTAATACATCTTTATTTTTTTCA 929422 Query 63870 ACTATAT--CCATGGTGAT-ACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTA 63926 || || | | || || ||| ||| || ||||| | | |||||||| |||| Sbjct 929421 ACAATTTGATAAACGTCATCACT---AATCATTGGAGATTTTAATCCATTTTTTTCATTA 929365 Query 63927 ACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGA 63986 | ||| ||||||| || |||| | |||| ||||||| |||| || |||| | Sbjct 929364 ATATAAAAATATAAATCAGAAATAACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAA 929305 Query 63987 TTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTG 64046 || || | || ||||| || || | | |||||||| ||||| ||||| | Sbjct 929304 TTGGAAATTGCAATTCTTGCAGCCAATGTTGCATAATCAGGATGAATAGTAGTCATATAA 929245 Query 64047 GCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCT 64106 || | |||| || |||| | | |||||||| | || || || || | ||| | || Sbjct 929244 GCACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACCCCTTCATAAACACCA 929185 Query 64107 TGAAT-AACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACA 64165 ||| | ||| | | || || |||||| ||||| | | | || |||||||| Sbjct 929184 GAAATGATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCCAAACCATAACA 929126 Query 64166 TAATTTTCTAATACGAGACGTGATTTTATCAAA 64198 |||| | || | ||| |||||||||||||| Sbjct 929125 TAATCTGGCTATTCTAGAAGTGATTTTATCAAA 929093 >seq14 Length=1659880 Score = 349 bits (386), Expect = 4e-91 Identities = 625/905 (69%), Gaps = 16/905 (2%) Strand=Plus/Plus Query 32994 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 33053 || || ||| || || |||||| || ||| || | |||||| || ||||| ||||| Sbjct 312431 TTTAGCCATGACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTT 312490 Query 33054 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAA-Attttt- 33111 |||| |||| || || |||||||| |||||||| || |||| |||||| ||| |||||| Sbjct 312491 TCCTGCCAAAGAGATGTTTTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTC 312550 Query 33112 -ttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCAT 33170 ||| |||||| || | |||||||| || || ||||| | |||| ||||||| Sbjct 312551 GTTA---CCCAATGCAACCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAA 312607 Query 33171 TTCACAATTCATTCCTAT--AAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCA 33228 || ||||||||||| ||| | || || || || | || | || || |||| Sbjct 312608 AGCAGCATTCATTCCTAACAAAGAT--ACAGGTAGTGCATCTTCAAAATATCTTTTTTCA 312665 Query 33229 ATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAA 33288 || || || || || || || || | | | ||| | | ||| | ||| Sbjct 312666 ATAGAAACTGCTTCAGTAATGATTCTTTCAGCAATTTTTGGATCAGGTTTGTTTTCCAAA 312725 Query 33289 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCG 33348 |||| || | | |||||| |||||| ||||| || || ||||||| ||| | ||| Sbjct 312726 TGTTGGAATAATAGACATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCA 312785 Query 33349 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAAT 33408 || ||||| || | || ||||| | || || || | |||||| || | ||| || Sbjct 312786 TTTGAAAAAGTTAAACCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAG 312845 Query 33409 GATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCG 33468 |||||||||||||| | ||||| || |||||||| || | | ||| || || || Sbjct 312846 GATCCAGAAAAGAAAACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGT 312905 Query 33469 GCG-CT--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATC 33525 || || ||| || ||||| | |||||| || ||||| | ||| | ||| || Sbjct 312906 GCATCTTCGTCTTGAATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATT 312965 Query 33526 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 33585 ||||| |||||||| || | | | | |||| || |||||| | ||||||||| ||| Sbjct 312966 GTTTCAATGGCATTGAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATC 313025 Query 33586 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 33645 ||||| ||| |||| ||||||||||| || || ||||||||||| |||||| Sbjct 313026 AAAAGTGAATAAGTTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACAT 313085 Query 33646 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATT 33705 | || || | ||| || ||||||| || ||| ||| ||||||||||||| || ||| Sbjct 313086 TTGGCTTCAGGAATTTGCACTTCTGCACTAAAATTTTCAACCAAATTTTCATTAACAATT 313145 Query 33706 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 33765 || ||| ||||||||||| || || || | || ||| || |||| | | | Sbjct 313146 CCATCAGAAGCTGCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTC 313205 Query 33766 AGT---TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAAT 33822 | | ||||||||||| | | |||||| |||| ||| | |||||| | |||||||| Sbjct 313206 ATTCTGTTATTCCAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAA 313265 Query 33823 GATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACA 33882 || || ||||| |||||| | ||| || |||| ||||| |||||| || | |||| Sbjct 313266 GAAGCTTCTGCACGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACA 313325 Query 33883 AATCT 33887 ||||| Sbjct 313326 AATCT 313330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947067623720