Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq14 187 6e-42 seq16 154 4e-32 >seq14 Length=1659880 Score = 187 bits (206), Expect = 6e-42 Identities = 566/854 (66%), Gaps = 29/854 (3%) Strand=Plus/Minus Query 22114 GCAGAAGCTTCCCTATGGGGTGTTTCCGAAATTGATATTTCCACTGATAAGACGGATTGG 22173 ||||||||||| | ||| || ||||||||| | |||| ||| | |||||| Sbjct 313276 GCAGAAGCTTCTTTTTGGACTGCAGAAGAAATTGATCTATCCAAAGATTTGCACGATTGG 313217 Query 22174 CCAAA---ACTTACAGAAAACGAACAACATTTTATCA--AATATA-TTCTAGCATTCTTT 22227 || | | | ||||| ||| | ||||| ||| | || | || ||||||| ||| Sbjct 313216 AATAACAGAATGAATGAAAATGAA--AGATTTT-TCATTAGTAGAGTTTTAGCATTTTTT 313160 Query 22228 GCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCTGAAATTCAA 22287 || | | || || || ||| ||| ||| | || |||||| | ||| | ||| Sbjct 313159 GCAGCTTCTGATGGAATTGTTAATGAAAATTTGGTTGAAAATTTTAGTGCAGAAGTGCAA 313100 Query 22288 TACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAA 22347 || || |||| |||||| || || | ||||| ||||| ||||| ||||| ||| Sbjct 313099 ATTCCTGAAGCCAAATGTTTTTACGGATTTCAAATTATGATGGAAAACATTCACAGTGAA 313040 Query 22348 ACATATTCTATGATGCTACAGTCACTCGTAG--AAGATAAAGACGAACAACGAAACTT-A 22404 || ||||| | || | | ||| || ||||| | | ||| | ||| || | Sbjct 313039 ACTTATTCACTTTTGATTGAT--ACTTATATCAAAGATCCAAAAGAA-AGCGATTTTTTA 312983 Query 22405 TTCCGCGCGATTCGCACCATTCAATCAATT--AAGAATAAGGCAGATTGGGCGCTGAAAT 22462 ||| || ||| || |||| |||| | ||||| |||||||| ||||| | | || Sbjct 312982 TTCAATGCCATTGAAACAATTCC-TCAAATCAAAGAA-AAGGCAGAATGGGCTATTAGAT 312925 Query 22463 GGATGAACAATGAACGTTCA---TTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAG 22519 |||| | | ||| | || || || ||| | | | |||||||||| || |||| Sbjct 312924 GGATTCAAGACGAAGATGCACTTTTTGCTGAAAGATTGGTGGCATTTGCTGCTGTGGAAG 312865 Query 22520 GCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGC 22579 | |||||||||||||| | ||| ||||||||||||| | || ||| | | |||| Sbjct 312864 GTGTTTTCTTTTCTGGATCCTTTGCTGCAATCTTTTGGTTGAAGAAAAAGGGGTTGATGC 312805 Query 22580 CGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTG 22639 | ||| |||| ||||||||||| || ||| | ||||||| || || ||||||||||||| Sbjct 312804 CAGGTTTAACTTTTTCAAATGAATTGATTTGTAGAGATGAAGGACTGCATACCGATTTTG 312745 Query 22640 CGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATGAAACTGTACTTGA-- 22697 | ||| | ||| || | ||| | | |||| | || ||| | | || | Sbjct 312744 CATGTCTATTAT-TC--CAACATTTGGAAAACAAACCT-GATCCAAAAAT-TGCTGAAAG 312690 Query 22698 TATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCGTTACCAGTAAG 22757 || ||||| | |||||| ||||| || | || || || |||| ||| Sbjct 312689 AATCATTACTGAAGCAGTTTCTATTGAAAAAAGATATTTTGAAGATGCACTACCTGTATC 312630 Query 22758 TCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCAGATCGTCT 22817 | | | || || ||||| | | |||| | |||| | |||||||||| ||| | | Sbjct 312629 TTTGTTAGGAATGAATGCTGCTTTGATGAATCAATATGTGGAATTTGTTGCTGATAGATT 312570 Query 22818 ATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGA 22877 ||| || || | ||| | | ||| |||| || || || |||||||| | ||||| Sbjct 312569 ATTGGTTGCATTGGGTAACGAAAAATATTACAATGTTTCCAACCCATTTGATTTTATGGA 312510 Query 22878 ACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAA 22937 | || || | | |||||| || |||||||| |||||||||||| ||| || ||||| Sbjct 312509 AAACATCTCTTTGGCAGGAAAAACAAATTTCTTTGAAAAAAGAGTTTCTGATTATCAAAA 312450 Query 22938 AGCAGGTGTTATGG 22951 ||||||||| |||| Sbjct 312449 AGCAGGTGTCATGG 312436 Score = 84.2 bits (92), Expect = 6e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 13096 TTTTTCAAAACAGGTGGCTTTCCGTCAAAAACATAGACGGGTTTAATTCCTGCTTCAATT 13155 ||||||||||||||||| || ||||||||||| || || ||||| ||||| ||||| Sbjct 941884 TTTTTCAAAACAGGTGGTTTCCCGTCAAAAACGTATACCGGTTTGATTCCGTTGTCAATC 941825 Query 13156 AATCGAATGGTTCGGTAAAAAATACCTGTTAAATGTGAAGT 13196 | || | |||| |||||| || || | ||||||||||| Sbjct 941824 ATTCTCAACGTTCTGTAAAACATCCCCATCAAATGTGAAGT 941784 >seq16 Length=1651669 Score = 154 bits (170), Expect = 4e-32 Identities = 536/827 (65%), Gaps = 17/827 (2%) Strand=Plus/Plus Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446 |||||| || | ||| || | || | ||| || ||| | |||||||| | |||| Sbjct 929483 TATTTT-GGTTTTAAAACTTTAGAAAGATCTTATTTATTAAGAATCAATGGCCAAATTGC 929541 Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 |||| | || || ||| || | ||| | |||||| |||| || ||| | ||| |||| Sbjct 929542 TGAAAGACCACAACATTTGATTATGAGAGTTGCTGTTGGAATTCATGGTAATGATATTGA 929601 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TATT-CACGCACGCCACGCCA 363564 | | ||||| ||||| || | || | | |||| ||| || || | ||| Sbjct 929602 RAAAGTTTTGGAAACTTATAA--TTTGATGTCATTAAGATATTTCACTCATGCTTCTCCA 929659 Query 363565 ACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATG 363624 ||| | | |||||| || |||| | ||||| |||||||| || |||||| | ||| Sbjct 929660 ACATTATTCAATGCAGGTACTCCAAGACCACAAATGTCTTCATGTTTTCTTGTTGCTATG 929719 Query 363625 AAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAG 363684 || || ||||| || || || || | |||||| | || | |||||| | ||||| || Sbjct 929720 AAAGATGATTCAATTGATGGAATTTATGACACTTTAAAAGAATGTGCTTTGATTTCTAAA 929779 Query 363685 AATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACAT---T 363741 | ||| || ||||||||| | || || ||| || | || |||| | ||| | Sbjct 929780 ACTGCTGGTGGAATTGGTCTTCATATTCATAATATTAGATCA----ACAGGTTCATATAT 929835 Query 363742 CGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 || || ||| ||| || ||||| || |||| ||| || | || || | ||||| Sbjct 929836 TGCTGGAACAAACGGAACTTCTAATGGATTGATTCCAATGATTAGAGTTTTCAATAATAC 929895 Query 363801 TGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 ||| || || || || || ||||| | |||| | || || |||||| | ||| | Sbjct 929896 TGCAAGATATGTTGATCAAGGTGGTAATAAAAGACCT--GGTGCTTTTGCTCTTTATTTA 929953 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAG 363918 || || ||| ||||||||||| ||| |||| | |||||||| || ||||| Sbjct 929954 GAACCATGGCATAGTGATATTTTTGATTTTATTGATATTCGGAAAAATCATGGTAAAGAA 930013 Query 363919 GAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGC 363978 ||| | | ||| | ||| |||| ||| | |||||| | || |||||| | Sbjct 930014 GAAATTAGAGCAAGAGATTTGTTTCCTGCCTTGTGGGTTCCAGATTTATTTATGCAAAAA 930073 Query 363979 GTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGAT 364038 || | | | | ||||| || | |||| ||| ||| ||| ||| | ||| Sbjct 930074 GTTAAAGAAAATTCAGATTGGACATTATTTTCTCCAAGTGAAGCTCCTGGTTTGAGTGAT 930133 Query 364039 GTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGT 364098 || | ||| | || | || ||||| | || |||| || |||| | | | Sbjct 930134 GTTTATGGTAAAGATTTTGAAAAATTATACAACAAATATGTTCAAGAAGGAAGAGGTAGA 930193 Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 || |||||| || || || |||||| |||||| |||| | || | || ||||| Sbjct 930194 AAAACAATTAAAGCTCAAAAATTATGGTATGCCATTTTGGAAGCACAAACAGAAACAGGT 930253 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205 ||||| | ||| | ||||||||| | || ||| || |||||||| Sbjct 930254 ACACCATTTATTGTTTACAAAGATGCTTGTAACAAAAAATCCAACCA 930300 Score = 105 bits (116), Expect = 2e-17 Identities = 206/297 (69%), Gaps = 8/297 (3%) Strand=Plus/Plus Query 111420 GTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTT--GGTCTTGTCG 111477 || ||||| ||||| || ||||||||| | || | ||| ||| |||| ||||| | Sbjct 123872 GTCAAAATCTGGGAAGGGAATGGATCAAGGGAATATCTCGAT--AGTTTAGGTCTGACAG 123929 Query 111478 ACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAG 111537 | | |||||||||||| || || ||||| || ||||||||| | || ||||| |||| Sbjct 123930 ATAGAAGAGAAGGTGATCTTGGTCCTGTTTATGGGTTTCAATGGAGACATTTTGGAGCAG 123989 Query 111538 ACTACAAAACCATG-CACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596 | ||||||| |||| ||||| |||||| ||||| ||||||| | | || Sbjct 123990 AATACAAAA-CATGTGACGACAACTATGATGGCCAGGGCTATGATCAACTGGCTGAGGTT 124048 Query 111597 ATTGATCAAATTAAGAACAACCCA-ACTTCTCGTCGCATTATTATGAGTGCATGGAACCC 111655 || | || | || |||||||| || | | | ||||| ||||||| |||||||| Sbjct 124049 ATATACAAACTGAAACACAACCCATACGAC-AGAAGAATTATCTTGAGTGCTTGGAACCC 124107 Query 111656 AAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712 | || |||||||||| | || || || ||| || | | || |||||||| Sbjct 124108 TCCAGATTTCAAAAAAATGGCTTTGCCTCCTTGCCATGTTTTCAGTCAATTTTATGT 124164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353316113294