Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq17 127 2e-24
seq2 102 7e-17
seq15 93.3 4e-14
>seq17
Length=834807
Score = 127 bits (140), Expect = 2e-24
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||||||||| || ||||| | || || |||||||||||| | ||| || ||
Sbjct 25518 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCT 25577
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
|||||| || ||||| || ||| ||||| || |||||||| | || |||
Sbjct 25578 TCTGACACTATT-GACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGA 25636
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
|| |||||| | || | ||| || |||||||| ||||||| | ||| || | || ||
Sbjct 25637 CCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTA 25696
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||||||||| || || | ||| |||| ||||||||| |||| ||
Sbjct 25697 CAACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGG 25747
>seq2
Length=821690
Score = 102 bits (112), Expect = 7e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 115294 TTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGT 115353
|||||||||||| | || || || || || ||| | ||| || || |||||| |
Sbjct 193647 TTTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCAT 193706
Query 115354 TGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACT 115413
| | || ||| ||||| || |||||||| | || ||| || |||||| |
Sbjct 193707 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 193766
Query 115414 TATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAA 115473
|| | ||| || |||||||| ||||||| | ||| || | || || |||||||||||
Sbjct 193767 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 193826
Query 115474 AGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||| || ||| | ||| |||| ||||||||| |||| ||
Sbjct 193827 AGAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGG 193865
>seq15
Length=1932387
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||| || ||||| | || || |||||||| || | ||| ||||||
Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | | ||||| || || || || || |||||||| | || || ||
Sbjct 1576935 GACAC-GATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCA 1576993
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||||| | || | ||| || ||||| || ||||| | || ||| || | || || ||
Sbjct 1576994 ACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAA 1577053
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||| ||||| ||||| || | ||| | || ||||||||| |||| ||
Sbjct 1577054 CATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGG 1577101
Score = 82.4 bits (90), Expect = 6e-11
Identities = 159/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341
||||||||||||||| || ||||| | || || || ||||| || | ||| || ||
Sbjct 1576643 AAAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATC 1576702
Query 115342 CAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400
||||| | | ||||| || || || || || ||||| || | || |
Sbjct 1576703 TTCAGACAC-GATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAG 1576761
Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460
| || |||||| | || | ||| || ||||| || ||||| | || ||| || | || |
Sbjct 1576762 ACCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACT 1576821
Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
| ||||| ||||| ||||| || | ||| | || ||||||||| |||| ||
Sbjct 1576822 ACAACATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGG 1576873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425343911874040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |