Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq15 104 2e-17 seq17 93.3 3e-14 >seq15 Length=1932387 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| || | ||| ||||||||||||||||| ||||||||||| | || ||| || || Sbjct 1577089 CTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCG 1577030 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || ||||| ||||| || ||| | || | | |||||||| || | || |||||| Sbjct 1577029 TCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTTG 1576970 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || | ||| || | | | | ||||| || ||| ||||| |||||| Sbjct 1576969 TCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGATG 1576910 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || |||| ||||| || ||||| ||||| Sbjct 1576909 GTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| |||| | |||| || | ||| ||||||||||||||||| ||||||||||| | Sbjct 1576874 CCCACCTCTCAATCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGA 1576815 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| || |||| ||||| ||||| || ||| | || | | |||||||| || Sbjct 1576814 CAAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 1576755 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | ||||||||||| || | ||| || | | | | ||||| | || Sbjct 1576754 AATCCCCTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCGAC 1576695 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 ||||| |||||||| || || |||| ||||| || ||||| |||||||| Sbjct 1576694 TTCCAAAGTGATGGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCATTTT 1576644 >seq17 Length=834807 Score = 93.3 bits (102), Expect = 3e-14 Identities = 155/222 (70%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| |||| ||| || ||||| || ||||| ||||||||||| | || ||| | | Sbjct 25735 CTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 25676 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || ||||||||||| || ||| | || | | |||||||| || | || |||||| Sbjct 25675 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTG 25616 Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898 || || || ||| || || | | | | |||||| | || ||||| ||| | Sbjct 25615 TCTTGGATTTTGGCT--TTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAA 25558 Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGT 16940 ||||||| || |||| ||||| || ||||| ||||| |||| Sbjct 25557 TGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTGT 25516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087916070830