Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq16 412 4e-110 seq14 345 5e-90 >seq16 Length=1651669 Score = 412 bits (456), Expect = 4e-110 Identities = 1457/2253 (65%), Gaps = 68/2253 (3%) Strand=Plus/Minus Query 61846 CAATG-TGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 61904 ||||| | ||||| |||| ||| || |||| || || | | |||||||| || |||| Sbjct 931322 CAATGGTAAATTGGATGGCAGCAGAAGCGGCTTGGGTTCTCAAGTAGTACATACCTGTTT 931263 Query 61905 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC- 61962 | | ||| | ||| |||||||||||||| || | ||| || | || | Sbjct 931262 TCAAACCTTTAGACCACCCGTAAAAATGCATGGAGGTCAATTTACCCATGGTTGGGGCCA 931203 Query 61963 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62022 || || || || |||| ||| ||| |||||| || || ||| |||||||||||||| Sbjct 931202 TG--ATGTGAATGTTCAAAGAATGAGATTGATCAATAAAAGCTGATCTGTCTGCAGCCAT 931145 Query 62023 TTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62081 | || || || ||||| | | |||||||| ||||| || || || |||| |||| Sbjct 931144 GTCGATGATGGTTTTTTGCGACAATTCCCAAACGGTTTTGTACAAGTCT-TTAAGTTCTT 931086 Query 62082 CTGGAAGGTTTGT---ATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 62138 |||| ||||| || ||||| || || | || ||||| | || || Sbjct 931085 GAGGAATGTTTGGCAAATGTTGAATAGACCCGTTGTTAGCAATAATGTTTGATTTCATGG 931026 Query 62139 CATCATTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 62197 |||| | ||| |||| | || ||| ||||||| | | || || || | ||| Sbjct 931025 CATCGTCCCA-AATTCCCAAATCAACCAAATCTCTAAGCAAGTATGGGTTCACAATTTGG 930967 Query 62198 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 62257 ||||| |||||||| ||| | || ||| || || ||| | ||||| | | | ||| Sbjct 930966 AATTCCCCAGACAAAGTTCTTCTAGAGTACATGTTTGAAGTAAATGGTTCGAAACATTCA 930907 Query 62258 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 62317 || | ||||| ||||| | |||||| || || |||||||| |||| | || ||| Sbjct 930906 TTGTAACCCAAGATTTGCGAAGTTGAAGCCGTTGGCATAGGAGCCAATAGCAATGAGTTT 930847 Query 62318 CTAAGACCGTATGTTC-TGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG 62376 || | ||| | | ||| ||||||| ||| | | || |||||| | ||||||||| || || Sbjct 930846 CTTAAACC-TGTTTTCATGATTTTTTCTCTCAAAGATTCCCATTCCCAAAGATCTGATGG 930788 Query 62377 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 62436 | ||| | || || | || |||||| | | | Sbjct 930787 AGCTCTGTTCCACATATCGAATTGCAAAACCCCTTGGGAAGCTGGAGATCCTTGAAACGA 930728 Query 62437 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 62496 | |||||| ||||||| | | || | ||| || || || ||| ||| || | Sbjct 930727 TTGGTATGGACCTTCCTCCACGGCCATTTCGTTGGAAGCTTCCAAAGCAGCGTGGTACAA 930668 Query 62497 GGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTC--CAGGCTATCAAATGGATAATTT 62554 |||||||| || | | ||||| | || ||||| ||| |||||||||| | Sbjct 930667 TGTTTCGAAAATTTGAATGTTTAGTTGTTTAGCTTCTTCAGA--ATCAAATGGAACTCTC 930610 Query 62555 AAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 62614 || || ||||| | ||| || || |||||||| || | | | || |||||||||||| | Sbjct 930609 AAAAGCATAAAAGTGTCGGCCAAACCTTGAACCCCTAAAGCAATTGGTCTATGTCTCATG 930550 Query 62615 TTAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62671 || ||| || ||| ||| | ||||| || || |||| || | | | || | Sbjct 930549 TTTGAGTTTCTTGCAGTTTCC---ACTGGATAGTAGTTTCTATCAATGACTCTGTTCAAG 930493 Query 62672 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---------TCGC 62722 ||||| || ||||| | || || | || ||| |||| | | | | Sbjct 930492 TTTCTTGTGATGACTTTTGCGACTTCATGCAATTTTTTGAAATTATAAGTTTGAGTTTGG 930433 Query 62723 CCATCTATT---AC-------AAACATGTTCAATGCAACAGATGCCAGATTACAAACGGC 62772 ||| | || ||| || | || |||| || |||| |||||||| || Sbjct 930432 TTRTCTTCTGAAACGTTGATAAAAGCTGGTAAA-GCAATGGAAGCCAAGTTACAAACTGC 930374 Query 62773 ---TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGAT 62829 | | |||||| || | ||||| | || ||| || | ||| | ||||| Sbjct 930373 AGTTTCGTCATTATCA---GAATATTCCACAATTTCACAACACAAATTGGATGATTTGAT 930317 Query 62830 GGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGG 62889 |||||| || |||| ||| || ||||||||||| ||||| || |||| ||| ||||| Sbjct 930316 GGTTCCCAAGTTTTTTTGGTTGGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGG 930257 Query 62890 AGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTAT 62949 ||||| ||||| | || | ||| | ||| || | ||| | | |||| || ||| | Sbjct 930256 TGTACCTGTTTCTGTTTGTGCTTCCAAAATGGCATACCATAATTTTTGAGCTTTAATTGT 930197 Query 62950 AGATTTGTATCTCTTTTCTCTTTCGTATAGTG--TATACAATCGTTCGAACTCGTCTCCC 63007 ||| || ||||| |||| ||| | | || ||| ||| || || | || Sbjct 930196 T--TTTCTACCTCTTCCTTCTTGAACATATTTGTTGTATAATTTTTCAAAATCTTTACCA 930139 Query 63008 CAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCC 63067 |||||| || |||||| |||| ||| | | || | ||| ||| | || Sbjct 930138 TAAACATCACTCAAACCAGGAGCTTCACTTGGAGAAAATAATGTCCAATCTGAATTTTCT 930079 Query 63068 TTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 63127 || ||| || |||||| | ||| |||| ||| | || ||| | |||||| | |||| Sbjct 930078 TTAACTTTTTGCATAAATAAATCTGGAACCCACAAGGCAGGAAACAAATCTCTTGCTCTA 930019 Query 63128 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 63187 ||| || || || ||| || || ||| | || | | ||||||| |||||| Sbjct 930018 ATTTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCAT 929959 Query 63188 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63247 ||||| || || | || | | | ||||| | ||| || || || ||||| | ||||| Sbjct 929958 GGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTT 929899 Query 63248 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCT 63307 || || ||||| ||||||| | ||||||||| | ||||| || || || || || || Sbjct 929898 GCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTTCCGTTTGTTCCA 929839 Query 63308 GAGATATAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCAT 63366 | ||||| || | | | ||||||| ||| ||| ||||| ||||| || || | Sbjct 929838 GCAATATATGAACCTGTTGATCTAATATTATGAATATGA-AGACCAATTCCACCAGCAGT 929780 Query 63367 TTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCAT 63426 |||||| || || || ||| |||||| || ||||| || || || || |||||| | Sbjct 929779 TTTAGAAATCAAAGCACATTCTTTTAAAGTGTCATAAATTCCATCAATTGAATCATCTTT 929720 Query 63427 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 63486 ||| || |||||||| ||||||||| | | ||| || ||||| ||||| || Sbjct 929719 CATAGCAACAAGAAAACATGAAGACATTTGTGGTCTTGGAGTACCTGCATTGAATAATGT 929660 Query 63487 AGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTC 63546 |||||||| ||||| || || || || | | ||| || || || | | || || Sbjct 929659 TGGAGAAGCATGAGTGAAATATCTTAATGACATCAAATTATAAGTTTCCAAAACTTTYTC 929600 Query 63547 TATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63604 ||||| ||| ||||||||| || || || | ||| | || || || ||||||||| Sbjct 929599 AATATC--ATTACCATGAATTCCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCA 929542 Query 63605 ACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAG 63664 | || | | || ||| | || || || ||| |||| |||||||||||||||||||| Sbjct 929541 GCAATTTGGCCATTGATTCTTAATAAATAAGATCTTTCTAAAGTTTTAAAACCAAAATAA 929482 Query 63665 TTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTA 63724 |||||| ||| |||| || |||| |||| | || | | ||| |||| ||| | | Sbjct 929481 TTGTATTGAAAATCTCTATCATAAACAATAGCACTATTTAATACATCTTTATTTTTTTCA 929422 Query 63725 AC---TACATCCATGGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTG 63781 || | || | | | ||| ||| || ||| | | | |||||||| ||| Sbjct 929421 ACAATTTGATAAACGTCATCACT---AATCATTGGAGATTTTAATCCATTTTTTTCATTA 929365 Query 63782 ACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGA 63841 | ||| ||||||| || |||| | |||| ||||||| |||| ||| |||| | Sbjct 929364 ATATAAAAATATAAATCAGAAATAACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAA 929305 Query 63842 TTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTG 63901 || || | || ||||| || || | | |||||||| ||||| ||||| | Sbjct 929304 TTGGAAATTGCAATTCTTGCAGCCAATGTTGCATAATCAGGATGAATAGTAGTCATATAA 929245 Query 63902 GCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCT 63961 || | |||| || |||| | | |||||||| | || || || || | ||| | || Sbjct 929244 GCACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACCCCTTCATAAACACCA 929185 Query 63962 TGGAT-AACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACA 64020 || | ||| | | || || |||||| ||||| | | | || |||||||| Sbjct 929184 GAAATGATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCCAAACCATAACA 929126 Query 64021 TAATTTTCTAATACGAGATGTGATTTTATCAAA 64053 |||| | || | ||| |||||||||||||| Sbjct 929125 TAATCTGGCTATTCTAGAAGTGATTTTATCAAA 929093 >seq14 Length=1659880 Score = 345 bits (382), Expect = 5e-90 Identities = 628/908 (69%), Gaps = 22/908 (2%) Strand=Plus/Plus Query 32351 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 32410 || || ||| || || |||||| || ||| || | |||||| || ||||| ||||| Sbjct 312431 TTTAGCCATGACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTT 312490 Query 32411 ACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAA-Attttt- 32468 ||| | || || || |||||||| ||||| ||||| |||| |||||| ||| |||||| Sbjct 312491 TCCTGCCAAAGAGATGTTTTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTC 312550 Query 32469 -ttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCAT 32527 ||| |||||| || | |||||||| || |||||||| | |||| ||||||| Sbjct 312551 GTTA---CCCAATGCAACCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAA 312607 Query 32528 TTCACAATTCATTCCTAT--AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCA 32585 || ||||||||||| ||| | || || || || | || | || || |||| Sbjct 312608 AGCAGCATTCATTCCTAACAAAGAT--ACAGGTAGTGCATCTTCAAAATATCTTTTTTCA 312665 Query 32586 ATAGAGACCGCGTCTGTTATAATAGATCTTACTGT--TTCTTCACTC-GGTGGATACAAT 32642 ||||| || || || || || || |||| | | || || || ||| | Sbjct 312666 ATAGAAACTGCTTCAGTAATGAT---TCTTTCAGCAATTTTTGGATCAGGTTTGTTTTCC 312722 Query 32643 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 32702 ||||||| || | | |||||| |||||| || || || || ||||||| ||| ||| Sbjct 312723 AAATGTTGGAATAATAGACATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAAT 312782 Query 32703 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 32762 || || ||||| || | || ||||| | || || || | |||||| || | ||| Sbjct 312783 TCATTTGAAAAAGTTAAACCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCA 312842 Query 32763 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAA 32822 || |||||||||||||||| ||||| || || ||||| || | | ||| || || || Sbjct 312843 AAGGATCCAGAAAAGAAAACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAA 312902 Query 32823 CCGGCG-CT--GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 32879 || || ||| || ||||| | |||||| || ||||| | ||| | ||| Sbjct 312903 AGTGCATCTTCGTCTTGAATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGA 312962 Query 32880 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 32939 ||||| || || ||||| || | | | | |||| || |||||| | ||| |||||| Sbjct 312963 ATTGTTTCAATGGCATTGAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCA 313022 Query 32940 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAG 32999 |||||||| ||| |||| ||||||||||| || |||||||||||||| || Sbjct 313023 ATCAAAAGTGAATAAGTTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAA 313082 Query 33000 CATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 33059 ||| | || || | ||| || ||||||| || ||| ||| | ||||||||||| || Sbjct 313083 CATTTGGCTTCAGGAATTTGCACTTCTGCACTAAAATTTTCAACCAAATTTTCATTAACA 313142 Query 33060 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGT 33119 ||||| ||| ||||||||||| || || || | || ||| || |||| | | Sbjct 313143 ATTCCATCAGAAGCTGCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCA 313202 Query 33120 GTTAGT---TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAA 33176 | | | ||||||||||| | | |||||| |||| ||| | |||||| | |||||| Sbjct 313203 TTCATTCTGTTATTCCAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAA 313262 Query 33177 AATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATA 33236 || || || ||||| |||||| | ||| || |||||||||| |||||||| | | Sbjct 313263 AAAGAAGCTTCTGCACGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAA 313322 Query 33237 ACAAATCT 33244 |||||||| Sbjct 313323 ACAAATCT 313330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631865353200