Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq17 163 2e-35 seq2 138 1e-27 seq15 134 1e-26 >seq17 Length=834807 Score = 163 bits (180), Expect = 2e-35 Identities = 176/230 (77%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || |||||||| |||||| |||| || | ||||| || || ||| Sbjct 25521 ATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCTTCT 25580 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || || || |||| |||| || ||||||||||| |||||||||||| Sbjct 25581 GACACTATTGA--CAATGTCAAAGCCAAAATCCAA-GACAAAGAAGGTATTCCACCTGAC 25637 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || ||||| || |||||||| ||||||| | | ||| || || ||| Sbjct 25638 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 25697 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||||||||||||||| || ||||| || | || | ||||| || Sbjct 25698 AACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGG 25747 >seq2 Length=821690 Score = 138 bits (152), Expect = 1e-27 Identities = 165/222 (74%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| || || || || ||||| | ||||| | ||||| || || || ||||| ||| Sbjct 193648 TTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCATC 193707 Query 25068 GA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCG 25123 || |||| |||| |||| || ||||||||||| ||||||||||||||||| | Sbjct 193708 GATAACGTCA---AAGCCAAAATCCAA-GACAAAGAAGGTATTCCACCTGACCAACAAAG 193763 Query 25124 GATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCA 25183 | || ||||| || |||||||| ||||||| | | ||| || || ||||| ||||| Sbjct 193764 ATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCA 193823 Query 25184 AAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||||| || ||||| || | || | ||||| || Sbjct 193824 AAAAGAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGG 193865 >seq15 Length=1932387 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || ||||| || ||| ||||||| | ||||| ||||| || Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| |||||||||||||||||||| |||||| Sbjct 1576935 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAA 1576994 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || | | || ||||| || ||||| || ||||| | | ||| || || ||||| Sbjct 1576995 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1577054 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||| || |||||||| |||||||| | || | ||||| || Sbjct 1577055 ATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGG 1577101 Score = 125 bits (138), Expect = 6e-24 Identities = 172/240 (72%), Gaps = 3/240 (1%) Strand=Plus/Plus Query 24986 ACAAAACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGA 25045 |||||| || ||||||||| || || || || ||||| || || ||||||| | || Sbjct 1576637 ACAAAA---AAAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGA 1576693 Query 25046 AGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGAT 25105 ||| || || || ||||| ||||| | ||| || ||| |||||||| ||||| Sbjct 1576694 AGTCGAATCTTCAGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGAT 1576753 Query 25106 TCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGT 25165 |||||| |||||||| | | || ||||| || ||||| || ||||| | | ||| | Sbjct 1576754 TCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTT 1576813 Query 25166 GGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| || ||||| || |||||||| |||||||| | || | ||||| || Sbjct 1576814 GTCGGACTACAACATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGG 1576873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327910219855