Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq17 163 2e-35
seq2 138 1e-27
seq15 134 1e-26
>seq17
Length=834807
Score = 163 bits (180), Expect = 2e-35
Identities = 176/230 (77%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || |||||||| |||||| |||| || | ||||| || || |||
Sbjct 25521 ATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCTTCT 25580
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || || || |||| |||| || ||||||||||| ||||||||||||
Sbjct 25581 GACACTATTGA--CAATGTCAAAGCCAAAATCCAA-GACAAAGAAGGTATTCCACCTGAC 25637
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| | | || ||||| || |||||||| ||||||| | | ||| || || |||
Sbjct 25638 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 25697
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||||||||||||||| || ||||| || | || | ||||| ||
Sbjct 25698 AACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGG 25747
>seq2
Length=821690
Score = 138 bits (152), Expect = 1e-27
Identities = 165/222 (74%), Gaps = 8/222 (4%)
Strand=Plus/Plus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
||||| || || || || ||||| | ||||| | ||||| || || || ||||| |||
Sbjct 193648 TTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCATC 193707
Query 25068 GA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCG 25123
|| |||| |||| |||| || ||||||||||| ||||||||||||||||| |
Sbjct 193708 GATAACGTCA---AAGCCAAAATCCAA-GACAAAGAAGGTATTCCACCTGACCAACAAAG 193763
Query 25124 GATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCA 25183
| || ||||| || |||||||| ||||||| | | ||| || || ||||| |||||
Sbjct 193764 ATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCA 193823
Query 25184 AAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||||||| || ||||| || | || | ||||| ||
Sbjct 193824 AAAAGAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGG 193865
>seq15
Length=1932387
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || ||||| || ||| ||||||| | ||||| ||||| ||
Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| | ||| || ||| |||||||||||||||||||| ||||||
Sbjct 1576935 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAA 1576994
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| | | || ||||| || ||||| || ||||| | | ||| || || |||||
Sbjct 1576995 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1577054
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||| || |||||||| |||||||| | || | ||||| ||
Sbjct 1577055 ATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGG 1577101
Score = 125 bits (138), Expect = 6e-24
Identities = 172/240 (72%), Gaps = 3/240 (1%)
Strand=Plus/Plus
Query 24986 ACAAAACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGA 25045
|||||| || ||||||||| || || || || ||||| || || ||||||| | ||
Sbjct 1576637 ACAAAA---AAAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGA 1576693
Query 25046 AGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGAT 25105
||| || || || ||||| ||||| | ||| || ||| |||||||| |||||
Sbjct 1576694 AGTCGAATCTTCAGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGAT 1576753
Query 25106 TCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGT 25165
|||||| |||||||| | | || ||||| || ||||| || ||||| | | ||| |
Sbjct 1576754 TCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTT 1576813
Query 25166 GGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| || ||||| || |||||||| |||||||| | || | ||||| ||
Sbjct 1576814 GTCGGACTACAACATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGG 1576873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327910219855
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |