Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq14 333 3e-86 >seq14 Length=1659880 Score = 333 bits (368), Expect = 3e-86 Identities = 625/900 (69%), Gaps = 23/900 (3%) Strand=Plus/Plus Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849 ||| ||||| |||||| || || |||| ||||||||||||||||||| |||||| | Sbjct 312437 CATGACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGC 312496 Query 92850 CAAAGATATCGAATTCACTAGTG---ATTGGATTCTTGGCGTTATAATACTTTTC---AC 92903 |||||| || | ||| || | ||| || | || ||||| ||||| || Sbjct 312497 CAAAGAGAT-GTTTTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTCGTTAC 312555 Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963 | ||| | ||||||||||||||| |||||||| | || ||| ||||||| || Sbjct 312556 C---CAATGCAACCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAG 312612 Query 92964 AATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAA 93023 ||||||||||| | | ||||||||| || || |||| | |||||| | | || || Sbjct 312613 CATTCATTCCTAACAAAGATACAGGTAGTGCATCT-TCAAAATATCTTTTTTCAATAGAA 312671 Query 93024 -CGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGT--GGTTTTTGTACGACATAAT 93080 | ||||| | | |||| || | | | | | || | | ||||| | | | | || | Sbjct 312672 ACTGCTTCAGTAATGATT-CTTTCAG-CAATTTTTGGATCAGGTTTGTTTTCCAAATGTT 312729 Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGC 93140 | | | || || ||||| |||||||| | ||||| |||| | ||||| ||||| Sbjct 312730 GGAATAATAGACATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTG 312789 Query 93141 TGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTAC 93200 || ||||||||||| | || || |||||| | |||||| |||| |||||| | Sbjct 312790 AAAAAGTTAAACCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATC 312849 Query 93201 CAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGG 93260 ||||||| || | ||||||||| || ||||||||||| | | ||| |||||| ||| Sbjct 312850 CAGAAAAGAAAACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGC-A 312908 Query 93261 AATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT 93319 || | || |||||| | | |||||| || || |||| || || ||| | |||| Sbjct 312909 TCTTCGTCTTGAATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTT 312968 Query 93320 TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379 || || || || |||| |||| | || | | |||| || || ||||| || || Sbjct 312969 TCAATGGCATTGAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAA 313028 Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439 || ||||| ||||| || | || ||||| |||||| |||||||| |||||| | Sbjct 313029 AGTGAATAAGTTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTG 313088 Query 93440 GCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCA 93499 ||||| | || ||||||||| | ||| | || || | ||||||||| || || ||| Sbjct 313089 GCTTCAGGAATTTGCACTTCTGCACTAAAATTTTCAACCAAATTTTCATTAACAATTCCA 313148 Query 93500 TCGGATGCTGCaaaaaaaGCCAATA-TATGCT-TTATAAAATGTTTC-TCATCA-TCTTT 93555 || || ||||||||||| || || | | | || | ||||| |||| | ||| || || Sbjct 313149 TCAGAAGCTGCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATT 313208 Query 93556 AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615 | |||| ||||||| | |||||| || ||||| | |||||| |||||||||| || Sbjct 313209 CTG-TTATTCCAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGA 313267 Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 |||||||| ||| || | ||| || || ||||||| |||||||| | ||||| Sbjct 313268 AGCTTCTGCACGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAA 313327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860681667080