Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq14 333 3e-86
>seq14
Length=1659880
Score = 333 bits (368), Expect = 3e-86
Identities = 625/900 (69%), Gaps = 23/900 (3%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
||| ||||| |||||| || || |||| ||||||||||||||||||| |||||| |
Sbjct 312437 CATGACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGC 312496
Query 92850 CAAAGATATCGAATTCACTAGTG---ATTGGATTCTTGGCGTTATAATACTTTTC---AC 92903
|||||| || | ||| || | ||| || | || ||||| ||||| ||
Sbjct 312497 CAAAGAGAT-GTTTTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTCGTTAC 312555
Query 92904 CGATCAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCAC 92963
| ||| | ||||||||||||||| |||||||| | || ||| ||||||| ||
Sbjct 312556 C---CAATGCAACCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAG 312612
Query 92964 AATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAA 93023
||||||||||| | | ||||||||| || || |||| | |||||| | | || ||
Sbjct 312613 CATTCATTCCTAACAAAGATACAGGTAGTGCATCT-TCAAAATATCTTTTTTCAATAGAA 312671
Query 93024 -CGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGT--GGTTTTTGTACGACATAAT 93080
| ||||| | | |||| || | | | | | || | | ||||| | | | | || |
Sbjct 312672 ACTGCTTCAGTAATGATT-CTTTCAG-CAATTTTTGGATCAGGTTTGTTTTCCAAATGTT 312729
Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGC 93140
| | | || || ||||| |||||||| | ||||| |||| | ||||| |||||
Sbjct 312730 GGAATAATAGACATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTG 312789
Query 93141 TGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTAC 93200
|| ||||||||||| | || || |||||| | |||||| |||| |||||| |
Sbjct 312790 AAAAAGTTAAACCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATC 312849
Query 93201 CAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGG 93260
||||||| || | ||||||||| || ||||||||||| | | ||| |||||| |||
Sbjct 312850 CAGAAAAGAAAACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGC-A 312908
Query 93261 AATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT 93319
|| | || |||||| | | |||||| || || |||| || || ||| | ||||
Sbjct 312909 TCTTCGTCTTGAATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTT 312968
Query 93320 TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379
|| || || || |||| |||| | || | | |||| || || ||||| || ||
Sbjct 312969 TCAATGGCATTGAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAA 313028
Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439
|| ||||| ||||| || | || ||||| |||||| |||||||| |||||| |
Sbjct 313029 AGTGAATAAGTTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTG 313088
Query 93440 GCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCA 93499
||||| | || ||||||||| | ||| | || || | ||||||||| || || |||
Sbjct 313089 GCTTCAGGAATTTGCACTTCTGCACTAAAATTTTCAACCAAATTTTCATTAACAATTCCA 313148
Query 93500 TCGGATGCTGCaaaaaaaGCCAATA-TATGCT-TTATAAAATGTTTC-TCATCA-TCTTT 93555
|| || ||||||||||| || || | | | || | ||||| |||| | ||| || ||
Sbjct 313149 TCAGAAGCTGCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATT 313208
Query 93556 AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615
| |||| ||||||| | |||||| || ||||| | |||||| |||||||||| ||
Sbjct 313209 CTG-TTATTCCAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGA 313267
Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675
|||||||| ||| || | ||| || || ||||||| |||||||| | |||||
Sbjct 313268 AGCTTCTGCACGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAA 313327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860681667080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |