Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq15 174 3e-38 seq17 159 6e-34 seq2 156 8e-33 >seq15 Length=1932387 Score = 174 bits (192), Expect = 3e-38 Identities = 167/214 (78%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || || || ||||||||||| ||||||||||| || || || | || || || || Sbjct 1576859 CAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTC 1576800 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| ||||| || || || || || | |||||||||||| |||||||| || || ||||| Sbjct 1576799 TTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCCTCTTTGTC 1576740 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||||||| ||||| ||||||| ||||| |||||||| |||||||| Sbjct 1576739 TTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCGACTTCCAAAGTGATGGT 1576680 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || || | || || ||||| || |||||| Sbjct 1576679 CTTCCCAGTCAATGTTTTAACGAAAATTTGCATT 1576646 Score = 172 bits (190), Expect = 1e-37 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || || || ||||||||||| ||||||||||| || || || | || || || || Sbjct 1577087 CAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTC 1577028 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| ||||| || || || || || | |||||||||||| |||||||| ||||| ||||| Sbjct 1577027 TTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTTGTC 1576968 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| ||||| | ||||||| ||||| ||||| | || || |||||||| |||||||| Sbjct 1576967 TTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGATGGT 1576908 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | || || ||||| || ||||| Sbjct 1576907 TTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875 >seq17 Length=834807 Score = 159 bits (176), Expect = 6e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || || ||||| |||||||| ||||| || || || | || || ||||| Sbjct 25733 CAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 25674 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | |||||||||||| |||||||| ||||| ||||| Sbjct 25673 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTC 25614 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || || ||||| || || ||||| | ||||| ||||||||||| ||||| Sbjct 25613 TTGGATTTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGT 25554 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | || || ||||| || ||||| Sbjct 25553 TTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 25521 >seq2 Length=821690 Score = 156 bits (172), Expect = 8e-33 Identities = 157/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| ||||| || || ||||| |||||||| ||||| || || || | || || ||||| Sbjct 193851 CAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 193792 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || || || || || || || | |||||||||||| |||||||| ||||| ||||| Sbjct 193791 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTC 193732 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || || |||||| ||||||||||| | ||||| ||||| | |||||| || Sbjct 193731 TTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCTAGGGTGATAGT 193672 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | ||| ||||| || Sbjct 193671 CTTACCAGTTAAGGTTTTGACAAA 193648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622204155240