Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq15 174 3e-38
seq17 159 6e-34
seq2 156 8e-33
>seq15
Length=1932387
Score = 174 bits (192), Expect = 3e-38
Identities = 167/214 (78%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || || ||||||||||| ||||||||||| || || || | || || || ||
Sbjct 1576859 CAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTC 1576800
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| ||||| || || || || || | |||||||||||| |||||||| || || |||||
Sbjct 1576799 TTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCCTCTTTGTC 1576740
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | ||||||| ||||| ||||||| ||||| |||||||| ||||||||
Sbjct 1576739 TTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCGACTTCCAAAGTGATGGT 1576680
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || || | || || ||||| || ||||||
Sbjct 1576679 CTTCCCAGTCAATGTTTTAACGAAAATTTGCATT 1576646
Score = 172 bits (190), Expect = 1e-37
Identities = 166/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| || || || ||||||||||| ||||||||||| || || || | || || || ||
Sbjct 1577087 CAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTC 1577028
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| ||||| || || || || || | |||||||||||| |||||||| ||||| |||||
Sbjct 1577027 TTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTTGTC 1576968
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| ||||| | ||||||| ||||| ||||| | || || |||||||| ||||||||
Sbjct 1576967 TTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGATGGT 1576908
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || | || || ||||| || |||||
Sbjct 1576907 TTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875
>seq17
Length=834807
Score = 159 bits (176), Expect = 6e-34
Identities = 163/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| || || ||||| |||||||| ||||| || || || | || || |||||
Sbjct 25733 CAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 25674
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | |||||||||||| |||||||| ||||| |||||
Sbjct 25673 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTC 25614
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || || ||||| || || ||||| | ||||| ||||||||||| |||||
Sbjct 25613 TTGGATTTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGT 25554
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || | || || ||||| || |||||
Sbjct 25553 TTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 25521
>seq2
Length=821690
Score = 156 bits (172), Expect = 8e-33
Identities = 157/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| ||||| || || ||||| |||||||| ||||| || || || | || || |||||
Sbjct 193851 CAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 193792
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || || || || || || || | |||||||||||| |||||||| ||||| |||||
Sbjct 193791 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTC 193732
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || || |||||| ||||||||||| | ||||| ||||| | |||||| ||
Sbjct 193731 TTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCTAGGGTGATAGT 193672
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||| ||||| ||
Sbjct 193671 CTTACCAGTTAAGGTTTTGACAAA 193648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622204155240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |