Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq17 114 9e-21 seq15 95.1 9e-15 seq2 86.0 4e-12 >seq17 Length=834807 Score = 114 bits (126), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 21830 CAAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGC 21889 ||| |||||||| || ||||||| || || || |||||||||||| ||||| ||| | Sbjct 25517 CAAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATC 25576 Query 21890 CGCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGT 21946 | || || | | | || | || ||||| || ||||| ||| | ||||| Sbjct 25577 TTCTGACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTG- 25635 Query 21947 AAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGA 22006 ||||||| ||| | ||||||||||| |||||| | |||||| | |||| || | || Sbjct 25636 --ACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGA 25693 Query 22007 TTACAATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 ||||| ||||| || ||||| || |||||| |||| || Sbjct 25694 CTACAACATTCAAAAAGAATCCACYCTTCATTTGGTTTT 25732 >seq15 Length=1932387 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 ||||||||||| || |||||||||| || || || ||||| || ||||| ||| | Sbjct 1576644 AAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATCT 1576703 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 |||| ||| | | | | | ||| || || || |||||||| | || | || Sbjct 1576704 TCAGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGAC 1576763 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| ||| | ||||||||||| ||||| | ||||| | |||| || | || ||| Sbjct 1576764 CAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTAC 1576823 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || || || ||||| || || |||||| | || || Sbjct 1576824 AACATCCAAAAGGAGTCCACGCTTCATTTAGTCTT 1576858 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || |||||||||| || || |||||||| || ||||| || || | Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || ||| | | | | | ||| || || || ||||| || | || | ||||| Sbjct 1576935 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAA 1576994 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || ||| | ||||||||||| ||||| | ||||| | |||| || | || ||||| Sbjct 1576995 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1577054 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || || ||||| || || |||||| | || || Sbjct 1577055 ATCCAAAAGGAGTCCACGCTTCATTTAGTTTT 1577086 >seq2 Length=821690 Score = 86.0 bits (94), Expect = 4e-12 Identities = 93/122 (76%), Gaps = 6/122 (5%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGT---ACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTA 21983 || ||||| ||| | ||||| ||||||| ||| | ||||||||||| |||||| | Sbjct 193732 GACAAAGAAGGTATTCCACCTG---ACCAACAAAGATTGATCTTTGCTGGTAAACAATTG 193788 Query 21984 GAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTA 22043 |||||| | |||| || | || ||||| ||||| || ||||| ||||||||| |||| Sbjct 193789 GAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAAGAATCCACTCTTCATTTGGTT 193848 Query 22044 TT 22045 || Sbjct 193849 TT 193850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358124725801018