Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq17 129 5e-25 seq2 129 5e-25 seq15 123 2e-23 >seq17 Length=834807 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||| || || ||||| ||||| || || || || | ||| || | Sbjct 25735 CTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 25676 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||||||||| || || | ||||||| ||| ||||| || ||||| |||||||| Sbjct 25675 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTG 25616 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| ||||| ||||| || | ||||| ||||| || ||||| | |||| Sbjct 25615 TCTTGGATTTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATG 25556 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || || | |||||| || |||||||||||| Sbjct 25555 GTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATC 25520 >seq2 Length=821690 Score = 129 bits (142), Expect = 5e-25 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||| || || ||||| ||||| || || || || | ||| || | Sbjct 193853 CTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCA 193794 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||||||||| || || | ||||||| ||| ||||| || ||||| |||||||| Sbjct 193793 TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTG 193734 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| ||||| ||||| || | || | |||||||||||| |||||||| || || | Sbjct 193733 TCTTGGATTTTGGCTTTGA-CGTTATCGATGGTGTCGGAAGATTCGACTTCTAGGGTGAT 193675 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAA 45332 || || || |||| ||||| |||||| Sbjct 193674 AGTCTTACCAGTTAAGGTTTTGACAAAA 193647 >seq15 Length=1932387 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| ||| ||||| || ||||||||||| || || || | ||| | Sbjct 1577089 CTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCG 1577030 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| ||||| || || | ||||||| ||| ||||| || ||||| |||||||| Sbjct 1577029 TCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTTG 1576970 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || || |||| || | || | ||||| || ||||||||||| | ||| | Sbjct 1576969 TCTTGGATCTTGGACTTGA-CGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGAT 1576911 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || || | ||||| || |||||||||||| Sbjct 1576910 GGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCATC 1576874 Score = 113 bits (124), Expect = 4e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| |||| ||| ||||| || ||||||||||| || || || | ||| | Sbjct 1576861 CTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCG 1576802 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || ||||| ||||| || || | ||||||| ||| ||||| || ||||| || ||||| Sbjct 1576801 TCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCCTCTTTG 1576742 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || || |||| || | || | ||||| ||||| |||||||| | ||| | Sbjct 1576741 TCTTGGATCTTGGACTTGA-CGTTGTCGATCGTGTCTGAAGATTCGACTTCCAAAGTGAT 1576683 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||||| || ||||||||||| Sbjct 1576682 GGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003103949320