Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq15 123 6e-23 seq2 104 6e-17 seq17 96.9 8e-15 >seq15 Length=1932387 Score = 123 bits (136), Expect = 6e-23 Identities = 161/222 (73%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | || || || ||||||||||||| ||||||||| | |||||| || || Sbjct 1576862 TCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCC 1576803 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||| || || || ||||| | | || ||||| || ||| || ||| Sbjct 1576802 GTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCCTCTTT 1576743 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| ||| |||| ||||||| | ||| || ||||| ||||| Sbjct 1576742 GTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCGACTTCCAAAGTGAT 1576683 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||||| || || | ||||| || |||||||| |||||| Sbjct 1576682 GGTCTTCCCAGTCAATGTTTTAACGAAAATTTG---CATTTT 1576644 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | || || || ||||||||||||| ||||||||| | |||||| || || Sbjct 1577090 TCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCC 1577031 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||||||| ||| || || || ||||| | | || ||||| || ||| |||||| Sbjct 1577030 GTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTT 1576971 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| ||| |||| ||||| | | || || ||||| ||||| Sbjct 1576970 GTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGAT 1576911 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || | ||||| || |||||||| Sbjct 1576910 GGTTTTCCCAGTCAATGTTTTAACGAAAATTTG 1576878 >seq2 Length=821690 Score = 104 bits (114), Expect = 6e-17 Identities = 150/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | || ||||| || || ||||| | ||||||||||| |||||| || || Sbjct 193854 TCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 193795 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| || || || || ||||| | | || ||||| || ||| |||||| Sbjct 193794 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 193735 Query 199534 CTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592 || || || ||| || || ||| |||| |||||| | | ||| || || | |||| Sbjct 193734 GTCTTGGAT-TTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCTAGGGTGA 193676 Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAA 199621 | |||||||| || | ||||| |||||| Sbjct 193675 TAGTCTTACCAGTTAAGGTTTTGACAAAA 193647 >seq17 Length=834807 Score = 96.9 bits (106), Expect = 8e-15 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | || || || || || ||||| | ||||||||||| |||||| || || Sbjct 25736 TCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 25677 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||||| || || || || ||||| | | || ||||| || ||| |||||| Sbjct 25676 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 25617 Query 199534 CTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGA 199592 || || || ||| || || || || | ||||| | | ||| || ||||| || | Sbjct 25616 GTCTTGGAT-TTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAA 25558 Query 199593 TCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || ||||| || | |||||| || |||||||| Sbjct 25557 TGGTTTTACCTGTCAAAGTTTTAACGAAAATTTG 25524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921343216139