Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq15 107 2e-18 >seq15 Length=1932387 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | ||| || | ||| | || |||||||||||| |||||||| || Sbjct 1576873 CCACCTCTCAATCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGAC 1576814 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||| | |||| || | ||| || || || || ||||| | || ||||| | || Sbjct 1576813 AAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 1576754 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 46545 | | ||| ||||| |||||| ||||| ||| | | | |||||| ||||| || Sbjct 1576753 ATCCCCTCTTTGTCTTGGATCTTGGACTTGA-CGTTGTCGATCGTGTCTGAAGATTCGAC 1576695 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 |||| |||||||| || || |||| |||||||| || ||||||||||| Sbjct 1576694 TTCCAAAGTGATGGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCATTTT 1576644 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| || | ||| || | ||| | || |||||||||||| |||||||| || Sbjct 1577101 CCACCTCTCAATCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGAC 1577042 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||| | |||| || | ||| || || || || ||||| | || ||||| | || Sbjct 1577041 AAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 1576982 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 46545 | | || ||||| |||||| ||||| ||| | | | |||||| || || || Sbjct 1576981 ATCCCTTCTTTGTCTTGGATCTTGGACTTGA-CGTTGTCGATCGTGTCCGAGGACTCGAC 1576923 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||||||||| || |||| |||||||| || |||||||| Sbjct 1576922 TTCCAAAGTGATGGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238279886840