Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq15 109 5e-19
seq17 91.5 1e-13
seq2 86.0 6e-12
seq14 82.4 8e-11
>seq15
Length=1932387
Score = 109 bits (120), Expect = 5e-19
Identities = 166/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 38238 aaaaaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAG 38297
|||||||||||||| ||||| ||||| | || || || |||||||| | || |||||
Sbjct 1576641 AAAAAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAA 1576700
Query 38298 GCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGC 38356
| | |||| | | |||| | || || |||| ||||||||||| ||||| |
Sbjct 1576701 TCTTCAGACACGATCGACAACG-TCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACC 1576759
Query 38357 CGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 38416
|||||||| | | || | || || |||||| |||| |||| | || | ||
Sbjct 1576760 AGACCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGA 1576819
Query 38417 CTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||||||||| | ||||| ||||| || || | |||||||| ||
Sbjct 1576820 CTACAACATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGG 1576873
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 aTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| | || || ||||||||||| | || |||||| || |
Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || || |||| |||||||| || ||||| | |||||
Sbjct 1576935 GACACGATCGACAACG-TCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCA 1576993
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| | | || | || || |||||| |||| |||| | || | ||||||||
Sbjct 1576994 ACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAA 1577053
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||||||| | ||||| ||||| || || | |||||||| ||
Sbjct 1577054 CATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGG 1577101
>seq17
Length=834807
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 38241 aaaaTGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| |||||||| ||||| ||||| | || || |||||||| ||| | || || || |
Sbjct 25518 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCT 25577
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | | | | |||| ||||||| |||||||| || ||||| | |||
Sbjct 25578 TCTGACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGAC 25637
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
||||| | | || | || || ||||| |||| || | | || | ||||||
Sbjct 25638 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 25697
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| ||| | || || |||||||| || | |||||||| ||
Sbjct 25698 AACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGG 25747
>seq2
Length=821690
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
|| || ||||| | || || || || |||||| | || ||||| | |||||| | |
Sbjct 193648 TTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCATC 193707
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | |||| ||||||| |||||||| || ||||| | |||||||| | |
Sbjct 193708 GATAACG-TCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 193766
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | || || ||||| |||| || | | || | ||||||||||| |||||
Sbjct 193767 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 193826
Query 38432 GGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||| | || || |||||||| || | |||||||| ||
Sbjct 193827 AGAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGG 193865
>seq14
Length=1659880
Score = 82.4 bits (90), Expect = 8e-11
Identities = 182/268 (68%), Gaps = 4/268 (1%)
Strand=Plus/Plus
Query 132875 CCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGA 132934
||||||| | ||| | | || ||||| ||| ||||| || || || || |||| |
Sbjct 312721 CCAAATGTTGGAATAATAGACATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCA 312780
Query 132935 GTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGG 132994
||| || ||||| || || ||||| | || ||| || | |||||| || || |
Sbjct 312781 ATTCATTTGAAAAAGTTAAACCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAG 312840
Query 132995 CGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTC-GCCG 133053
| || || |||||||| || || || || || || || ||||||| | || ||
Sbjct 312841 CAAAGGATCCAGAAAAGAAAACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAA 312900
Query 133054 AACGTGGCTTCTTTG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCA 133112
|| ||| | |||| | || | ||||| | | |||||||| |||||||||||||
Sbjct 312901 AAAGTG-CATCTTCGTCTTGA-ATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTG 312958
Query 133113 CGGCATCGTTTCGATGGCGTTCAACAAA 133140
|| || ||||| ||||| || || |||
Sbjct 312959 AGGAATTGTTTCAATGGCATTGAATAAA 312986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172693713280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |