Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq16 203 4e-47 seq4 86.0 8e-12 >seq16 Length=1651669 Score = 203 bits (224), Expect = 4e-47 Identities = 907/1420 (64%), Gaps = 37/1420 (3%) Strand=Plus/Plus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| ||||| | || | ||| | || || | || || ||||| | |||||||| Sbjct 929543 GAAAGACCACAACATTTGATTATGAGAGTTGCTGTTGGAATTCATGGTAATGATATTGAR 929602 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGG-TATGTTCATCCACGCAACACCAAC 111724 |||||||| || || | |||||| | ||| |||| || || | ||||| Sbjct 929603 AAAGTTTTGGAAACTTATAATTTGATGTCATTAAGATAT-TTCACTCATGCTTCTCCAAC 929661 Query 111725 CCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAA 111784 | ||||| || ||||| |||||||| |||||||| ||||| ||| |||| | || Sbjct 929662 ATTATTCAATGCAGGTACTCCAAGACCACAAATGTCTTCATGTTTTCTTGTTGCTATGAA 929721 Query 111785 GGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTG 111844 || |||||||| |||| ||||| | |||| | | |||||||| || || || Sbjct 929722 AGATGATTCAATTGATGGAATTTATGACACTTTAAAAGAATGTGCTTTGATTTCTAAAAC 929781 Query 111845 GGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAG 111903 |||||||| || || | || || ||| || | ||| | |||| || | |||| | Sbjct 929782 TGCTGGTGGAATTGGTCTTCATATTCATAATATTAGATC-AACAGGTTCATATATTGCTG 929840 Query 111904 GTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 111963 | ||||| || || |||| | ||||||||| || | || || || || || Sbjct 929841 GAACAAACGGAACTTCTAATGGATTGATTCCAATGATTAGAGTTTTCAATAATACTGCAA 929900 Query 111964 GCTATGTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCA 112019 | ||||| | |||| ||| | ||| || || | || | ||| | || ||| Sbjct 929901 GATATGTTGATCAAGGTGGTAATAA-AAGACCTGGTGCTTTTGCTCTTTATTTAGAACCA 929959 Query 112020 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCG 112079 ||||| ||||| | || || |||| | || || || ||| | || || Sbjct 929960 TGGCATAGTGATATTTTTGATTTTATTGATATTCGGAAAAATCATGGTAAAGAAGAAATT 930019 Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139 | | ||| | || | || | ||| |||||||| | || ||| | | |||| | Sbjct 930020 AGAGCAAGAGATTTGTTTCCTGCCTTGTGGGTTCCAGATTTATTTATGCAAAAAGTTAAA 930079 Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199 || | | ||||| | | |||| |||| | || || ||| | |||| Sbjct 930080 GAAAATTCAGATTGGACATTATTTTCTCCAAGTGAAGCTCCTGGTTTGAGTGATGTTTAT 930139 Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACG 112259 ||| | || |||||| | |||| || || | ||||| | | | | || Sbjct 930140 GGTAAAGATTTTGAAAAATTATACAACAAATATGTTCAAGAAGGAAGAGGTAGAAAAACA 930199 Query 112260 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | |||| | | ||| | || ||| | | | ||||| || || ||||||||| Sbjct 930200 ATTAAAGCTCAAAAATTATGGTATGCCATTTTGGAAGCACAAACAGAAACAGGTACACCA 930259 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | ||| |||||||||| || |||||| |||| || ||||| || ||||| ||| Sbjct 930260 TTTATTGTTTACAAAGATGCTTGTAACAAAAAATCCAACCAAAAAAACTTGGGAACCATC 930319 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 || ||||| | ||| ||||| |||||| | | || || || || || || || Sbjct 930320 AAATCATCCAATTTGTGTTGTGAAATTGTGGAATATTCTGATAATGACGAAACTGCAGTT 930379 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA---TCCAGA-GACAA------- 112488 |||||| | || || || ||| | || | | | | | |||| || || Sbjct 930380 TGTAACTTGGCTTCCATTGCTTTACCAGCTTTTATCAACGTTTCAGAAGAYAACCAAACT 930439 Query 112489 -AGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAAC 112547 | || | | ||| ||||| | || ||||| | ||| |||||| |||| | ||| Sbjct 930440 CAAACTTATAATTTCAAAAAATTGCATGAAGTCGCAAAAGTCATCACAAGAAACTTGAAC 930499 Query 112548 AGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACAC 112607 ||||| ||||||||||| | || || || || ||||| | || || || |||||||| Sbjct 930500 AGAGTCATTGATAGAAACTACTATCCAGTGGAAACTGCAAGAAACTCAAACATGAGACAT 930559 Query 112608 CGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCA 112667 | ||||||| | | || || |||||| | || || || || |||| | || Sbjct 930560 AGACCAATTGCTTTAGGGGTTCAAGGTTTGGCCGACACTTTTATGCTTTTGAGAGTTCCA 930619 Query 112668 TTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCC 112727 |||||||| || ||||| || || | || | || || || ||| |||| ||||| Sbjct 930620 TTTGATTCTGAAGAAGCTAAACAACTAAACATTCAAATTTTCGAAACATTGTACCACGCT 930679 Query 112728 GCTCTTGAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 112784 ||| | || || ||| || |||| | || || |||||||| || | ||| | Sbjct 930680 GCTTTGGAAGC---TTCCAACGAAATGGCCGTGGAGGAAGGTCCATACCAATCGTTTCAA 930736 Query 112785 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCA--AGC 112842 || ||||||||||| |||||||| | ||||| ||||||||| | | | ||| || Sbjct 930737 GGATCTCCAGCTTCCCAAGGGGTTTTGCAATTCGATATGTGGAACAGAG-CTCCATCAG- 930794 Query 112843 TTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 112902 || | || ||||| || | | ||| |||| | | | ||| | | ||| || Sbjct 930795 ATCTTTGGGAATGGGAATCTTTGAGAGAAAAAATCATGAAAACAGGTTTAAGAAAC--TC 930852 Query 112903 TTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 112960 || | |||| || |||||||| || || || | |||||||||||| | |||||||| Sbjct 930853 ATTGCTATTGGCTCCTATGCCAACGGCTTCAACTTCGCAAATCTTGGGTTACAATGAATG 930912 Query 112961 CTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAAC 112999 || ||||| | || | ||||| || ||| |||||||| Sbjct 930913 TTTCGAACCATTTACTTCAAACATGTACTCT-AGAAGAAC 930951 >seq4 Length=608367 Score = 86.0 bits (94), Expect = 8e-12 Identities = 112/153 (73%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 163557 TTGCGCCACGATCTGGTCTCGCTGTGAAACACGGTATCCAAGTTGGTGCGGGTGTTATTG 163616 |||| || ||||||| ||||| | |||||||| ||| | ||||| |||||| ||| Sbjct 362959 TTGCTCCTAGATCTGGGCTCGCAGCAAAACACGGAATCAACACCGGTGCTGGTGTTGTTG 363018 Query 163617 ATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTCTTCAATCATGGAGACAAAGACTTTG 163676 | |||||||| || |||||||| ||| |||| || || || | || |||||||||| Sbjct 363019 ACAGGGACTACACTGGGGAAGTCAAGGTCATTCTTTTTAACCACAGCGAAAAAGACTTTG 363078 Query 163677 AGGT--AAAGAGGGGGGAGCGCATCGCACAACT 163707 | || || ||| | || | |||||||||| Sbjct 363079 AAGTTGTAAAAGGTGACAGAG--TCGCACAACT 363109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742268092240