Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq16 187 3e-42 seq14 120 4e-22 >seq16 Length=1651669 Score = 187 bits (206), Expect = 3e-42 Identities = 480/721 (67%), Gaps = 24/721 (3%) Strand=Plus/Minus Query 105923 GTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGAT 105981 |||||||| ||| || ||||| | || | ||||| || |||||||| | ||||||||| Sbjct 930951 GTTCTTCT-AGAGTACATGTTTGAAGTAAATGGTTCGAAACATTCATTGTAACCCAAGAT 930893 Query 105982 TTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTT 106039 ||| | || || || |||||||| || |||| | || || ||| | | ||| || Sbjct 930892 TTGCGAAGTTGAAGCCGTTGGCATAGGAGCCAATAGCAATGA--GTTTCTTAAACCTGTT 930835 Query 106040 TCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCC 106097 | | |||| ||| | | | ||||| || | || || ||| | | | || Sbjct 930834 TTCATGATTTTTTCTCTCAAAGATTCCCATTCCCAAA-GATCTGATGGAG-CTCTGTTCC 930777 Query 106098 ACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAAC 106157 ||||||| ||||| | ||||||||||| | ||||| || | ||| | | || | || Sbjct 930776 ACATATCGAATTGCAAAACCCCTTGGGAAGCTGGAGATCCTTGAAACGATTGGTATGGAC 930717 Query 106158 CTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGA 106217 ||| | | |||| ||| | || |||| | ||||| |||| ||||| || | Sbjct 930716 CTTCCTCCACGGCCATTTCGTTGGAAGCTTCCAAAGCAGCGTGGTACAATGTTTCGAAAA 930657 Query 106218 TACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAAT 106276 | || || | | || ||||| || |||||||||| | | || || ||||| Sbjct 930656 TTTGAATGTTTAGTTGTTTAGCTTCTTCAGAATCAAATG-GAACTCTCAAAAGCATAAAA 930598 Query 106277 ACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGC 106336 || || | ||||||||| || ||| |||| ||||| |||| ||| || || |||| Sbjct 930597 GTGTCGGCCAAACCTTGAACCCCTAAAGCAATTGGTCTATGTCTCATGTTTGAGTTTCTT 930538 Query 106337 GCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATC 106396 ||||| || || ||||| | ||||| |||||||||| ||| | ||| | || | | Sbjct 930537 GCAGTTTCCACTGGATAGTAGTTTCTATCAATGACTCTGTTCAAGTTTCTTGTGATGACT 930478 Query 106397 TTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAG------TCTCTT------CA 106444 |||| || |||||| | ||||| ||| | |||| ||| | |||| | Sbjct 930477 TTTGCGACTTCATGCAATTTTTTGAAATTATAAGTTTGAGTTTGGTTRTCTTCTGAAACG 930418 Query 106445 TTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCT 106504 |||| | | ||| | || || || ||||| || ||||| || || || || ||||| Sbjct 930417 TTGATAAAAGCTGGTAAAGCAATGGAAGCCAAGTTACAAACTGCAGTTTCGTCATTATCA 930358 Query 106505 GTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGG 106564 | || || | |||||| |||||| ||||| || || || ||||| || |||||| Sbjct 930357 GAATATTCCACAATTTCACAACACAAATTGGATGATTTGATGGTTCCCAAGTTTTTTTGG 930298 Query 106565 TTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGT 106624 || |||||||| || ||||| ||||| | || | || || || || || || ||| Sbjct 930297 TTGGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTTCTGTTTGT 930238 Query 106625 G 106625 | Sbjct 930237 G 930237 >seq14 Length=1659880 Score = 120 bits (132), Expect = 4e-22 Identities = 340/511 (67%), Gaps = 11/511 (2%) Strand=Plus/Plus Query 117286 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCC 117345 || || || ||||||| |||| | ||||||||| || || |||||||| | ||| Sbjct 312756 TGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACCTGGCATCAACCCC 312815 Query 117346 CGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||||||| | || || ||| || || || || ||||| | ||| |||||| Sbjct 312816 TTTTTCTTCAACCAAAAGATTGCAGCA-AAGGATCCAGAAAAGAAAACACCTTCCACAGC 312874 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAA-CCATTTCATTG 117463 ||||| || | | | || || || || | ||| || | || |||| | || | Sbjct 312875 AGCAAATGCCACCAATCTTTCAGCAAAA-AGTGCATCTTCGTCTTGAATCCATCTAATAG 312933 Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCT 117523 |||||| ||||| | | || || | |||| ||||| | ||||| | Sbjct 312934 CCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATTGAATAAAAAATCGC 312993 Query 117524 TTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCA 117583 |||| | ||| || || || | |||||||| |||||| ||||| | |||| Sbjct 312994 TTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGAATAAGTTTCACTGTGAATGT 313053 Query 117584 TTTC-ATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCC 117642 |||| || || |||| || |||| || | ||||| || |||||||| | Sbjct 313054 TTTCCATCATAAT-TTGAAATCCGTAAAAACATTTGGCTTCAGGAATTTGCACTTCTGCA 313112 Query 117643 GCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 117702 |||||| | | | ||| ||| |||||||||||| || | ||||| ||||| | Sbjct 313113 CTAAAATTTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCTGCAAAAAATGCTAAA 313172 Query 117703 A-TGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATC 117758 | | ||| | ||||| ||||||||||||||| | | ||||| |||| | ||| Sbjct 313173 ACTCTAC-TAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTGCAAATC 313231 Query 117759 TTTGGACAAATCAACTTCTTCCGCAGTCCAA 117789 |||||| | ||||| |||||| ||||||||| Sbjct 313232 TTTGGATAGATCAATTTCTTCTGCAGTCCAA 313262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980674629080