Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq15 109 6e-19
>seq15
Length=1932387
Score = 109 bits (120), Expect = 6e-19
Identities = 154/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 153214 AAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAATCCTA 153273
|||| || || || ||| | ||| ||||| || || |||| | | ||| ||
Sbjct 818067 AAGGGTATTACGGTACCCATCTACCACCAGTGATCCAAAGAAAYTTGTTGGAGTCGCCGG 818126
Query 153274 GTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTT 153333
||||||||||| ||||| || || || | || || || || || |||||||| | |
Sbjct 818127 AATGGTACACATCCTACACCCCMTAYCAGCCGGAAATCTCGCAAGGTAGATTGGARTCGT 818186
Query 153334 TATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTC 153393
| || |||| |||||| | |||| || | || ||||||||| | |||||||| ||||
Sbjct 818187 TGTTGAATTTYCAAACGGTGATCAGCGACATGACGGGATTACCAGTTGCAAACGCGTCTC 818246
Query 153394 TATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATT 153433
| |||||||||| || || || | ||||| |||| ||
Sbjct 818247 TTTTAGATGAAGGTACCGCTGCTGGTGAAGCTTTGCTTTT 818286
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806
|||||| | |||||| ||||| ||||| | |||| |||| ||| ||||| ||
Sbjct 818627 GATATTTGTTTAGGTACCTCACAAAGATTTGGGTTCCCTACTGGATTTGGGGGTCCACAC 818686
Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866
|| || |||||| | || || | || | ||||| || || ||||| || |||
Sbjct 818687 GCRGCTTTCTTTTCCGTTGTTGAGAAATTGAACCGTAAGATCCCGGGAAGAATCGTTGGT 818746
Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926
||| ||| || ||| ||||| |||||||| || |||| || ||||| |||
Sbjct 818747 GTGTCCAAAGACAGATTGGGTGGGAAAGCGTACAGATTGGCTTTACAAACCAGAGAACAG 818806
Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGC 153973
||||||| ||||||||||| ||| ||||| || || ||||| ||
Sbjct 818807 CATATCAAAAGAGACAAAGCCACCTCCAACATTTGTACCGCTCAAGC 818853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212676917280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |