Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq17 190 5e-43
seq2 178 3e-39
seq15 170 4e-37
>seq17
Length=834807
Score = 190 bits (210), Expect = 5e-43
Identities = 175/222 (79%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | ||||| ||||| ||||||||||| ||||| || | | |||
Sbjct 25742 TCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGT 25683
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | || ||||| || ||||| | || ||||||||| || ||||| ||
Sbjct 25682 TCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACC 25623
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||||||||| ||||| ||||| || ||||| ||||| ||| ||| ||||| |
Sbjct 25622 TTCTTTGTCTTGGATTTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAA 25563
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| || || |||||||||||||| ||||| | ||||||
Sbjct 25562 GGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 25521
>seq2
Length=821690
Score = 178 bits (196), Expect = 3e-39
Identities = 167/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | ||||||||||| ||||||||||| ||||| || | | |||
Sbjct 193860 TCTCAATCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGT 193801
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | || ||||| || ||||| | || ||||||||| || ||||| ||
Sbjct 193800 TCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACC 193741
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||||||||| ||||| |||||||| || |||||||| ||| ||| ||||| ||
Sbjct 193740 TTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCTAG 193681
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
||| | ||||| || || || ||||| || ||
Sbjct 193680 GGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 193648
>seq15
Length=1932387
Score = 170 bits (188), Expect = 4e-37
Identities = 172/224 (77%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | ||||| |||||||| ||||| || ||||| || | | |||
Sbjct 1576868 TCTCAATCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGT 1576809
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | ||| ||||| || ||||| | || |||||||||||| ||||| ||
Sbjct 1576808 TCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCC 1576749
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||||||||||| || || ||||||||| || || ||||| ||| ||| ||||| |
Sbjct 1576748 CTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCGACTTCCAA 1576689
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
|| | ||||| || ||||| ||||| ||||| | ||||||||
Sbjct 1576688 AGTGATGGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCATTT 1576645
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | ||||||||| | ||||| |||||||| ||||| || ||||| || | | |||
Sbjct 1577096 TCTCAATCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGT 1577037
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| || ||||| | ||| ||||| || ||||| | || |||||||||||| ||||| ||
Sbjct 1577036 TCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCC 1576977
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||||||||| || || ||||||||| || || |||||||| || ||||| |
Sbjct 1576976 TTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAA 1576917
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | || || || ||||| ||||| ||||| | ||||||
Sbjct 1576916 AGTGATGGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481358341039
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |