Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq14 453 1e-122
seq16 430 1e-115
>seq14
Length=1659880
Score = 453 bits (502), Expect = 1e-122
Identities = 643/898 (72%), Gaps = 11/898 (1%)
Strand=Plus/Plus
Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728
||||||||| || | ||||||||||||||||||||| |||||||| | || || ||
Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508
Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788
|||||||||||||||||| || ||||| || ||||| | || ||| | | |
Sbjct 312509 TTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTCGTTACCCAATGCAACCAA 312568
Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAA 18848
|| |||||| || ||||||| | |||| ||||||| | || ||||||||||| ||
Sbjct 312569 TAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAACAA 312628
Query 18849 TTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAAT 18908
||||||||||||||| || | || || ||| ||| ||||| || | || ||
Sbjct 312629 AGATACAGGTAGTGCATCTTCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAATGAT 312688
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAAA 18968
| || | | | | || ||| || | | ||||| || | | |||||||||
Sbjct 312689 TCTTTCAGCAATTTTTGGATCAGGTTTGTTTTCCAAATGTTGGAATAATAGACATGCAAA 312748
Query 18969 ATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCAT 19028
||| ||| ||||| || ||||||| ||||||||||| ||||| |||||||| |||||
Sbjct 312749 ATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACCTGGCAT 312808
Query 19029 CAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTC 19088
|| || |||| || ||||| || || | |||||| |||||||||||||| | ||||||
Sbjct 312809 CAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAAACACCTTC 312868
Query 19089 TACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTT 19148
|| || ||||| || || | |||||| || || ||||| | | ||||||||| |
Sbjct 312869 CACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTGAATCCATCT 312928
Query 19149 CAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208
| ||||| || ||||| | ||| | || ||||| || || | ||| |||| | |
Sbjct 312929 AATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATTGAATA-AAA 312987
Query 19209 CATACGC--TCATCTGTATCTTTAACATATGCATCTATCAATAAACTG--TACATTTCTG 19264
|| ||| || | || |||||| | ||| | ||| |||| ||| || || ||||
Sbjct 312988 AAT-CGCTTTCTTTTGGATCTTTGATATAAGTATCAATCA--AAAGTGAATAAGTTTCAC 313044
Query 19265 AATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTA 19324
||||| ||||| || || |||||||||||||||||| | ||||| | || || |
Sbjct 313045 TGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGAATTTGCA 313104
Query 19325 CTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAA 19384
|||| || ||| |||| ||||||||||||||||| ||||||||| |||||||||||
Sbjct 313105 CTTCTGCACTAAAATTTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCTGCAAAAA 313164
Query 19385 ATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCCAATCAT 19441
||||||| || |||| ||| | |||||| | | | | |||||||||| |
Sbjct 313165 ATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGT 313224
Query 19442 TAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTAT 19501
| |||||| |||| ||| | |||||| | |||||||||||||| ||||| |||||
Sbjct 313225 GCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGCACGTTTAT 313284
Query 19502 ACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTC 19559
| | ||| || ||| |||||| || ||||| | ||||||||| |||| |||||
Sbjct 313285 AAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCTTCTTTTGTTTTC 313342
>seq16
Length=1651669
Score = 430 bits (476), Expect = 1e-115
Identities = 887/1310 (68%), Gaps = 40/1310 (3%)
Strand=Plus/Minus
Query 47918 ATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTG 47977
|| || ||||| | |||||| ||| | ||| ||||||| || ||||| ||||
Sbjct 930361 ATCAGAATATTCCACAATTTCACAACACAAATTGGATGATTTGATGGTTCCCAAGTTTTT 930302
Query 47978 ATGATT--ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCT 48035
|| || ||| |||||||| || || ||||||| ||||| ||||| || ||||||
Sbjct 930301 TTGGTTGGATTTT--TTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTTCT 930244
Query 48036 ATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTA 48095
| || | ||| | || | | ||| | | ||| || || |||| || |
Sbjct 930243 GTTTGTGCTTCCAAAATGGCATACCATAATTTTTGAGCTTTAATTGTTTTTCTACCTCTT 930184
Query 48096 TTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAAC 48155
|| || | ||||| | ||||| || ||||| || | ||||| |||| | ||
Sbjct 930183 CCTTCTTGAACATATTTGTTGTATAATTTTTCAAAATCTTTACCATAAACATCACTCAAA 930124
Query 48156 CCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATA 48215
|||||| |||| | ||| | | |||| |||||| || | ||| ||| | ||||
Sbjct 930123 CCAGGAGCTTCACTTGGAGAAAATAATGTCCAATCTGAATTTTCTTTAACTTTTTGCATA 930064
Query 48216 AATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCA 48275
|||| |||||| | ||| | || ||| ||||| || | ||| | |||||| || |||
Sbjct 930063 AATAAATCTGGAACCCACAAGGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTTTACCA 930004
Query 48276 CTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATT 48335
||| | || |||| ||| || | |||||| |||||||||||||||||| |
Sbjct 930003 TGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGGTTCTAAATAAAGA 929944
Query 48336 GCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAA 48395
|| | |||| |||| ||||||||| |||||||| | |||||| |||||||| || ||
Sbjct 929943 GCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTATTGAAA 929884
Query 48396 ACTCTTAACATTGGGA-CAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCC 48454
||||| | |||||| | |||| ||||| || | || || ||||| | |||||| ||
Sbjct 929883 ACTCTAATCATTGGAATCAAT-CCATTAGAAGTTCCGTTTGTTCCAGCAATATATGAACC 929825
Query 48455 ACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGC 48514
| | ||| |||||| ||| || ||| || ||||| || ||||||| || | |||
Sbjct 929824 TGTTGATCTAATATTATGAATATGAAGACCAATTCCACCAGCAGTTTTAGAAATCAAAGC 929765
Query 48515 ACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAA 48574
||| ||| | || ||||||||||| || || ||||||| ||||| | |||||
Sbjct 929764 ACATTCTTTTAAAGTGTCATAAATTCCATCAATTGAATCATCTTTCATAGCAACAAGAAA 929705
Query 48575 ACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAAT 48634
||| ||||||||| || ||| |||| ||| |||||||||||||| |||||| |
Sbjct 929704 ACATGAAGACATTTGTGGTCTTGGAGTACCTGCATTGAATAATGTTGGAGAAGCATGAGT 929645
Query 48635 AAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTG--A 48692
|| || | ||| | ||| ||||| ||||| | ||| || ||||| ||| |
Sbjct 929644 GAAATATCTTAATGACATCAAATTATAAGTTTCCAAAACTTTYTCAATATC--ATTACCA 929587
Query 48693 TGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTT 48752
|| || || | || || | ||| | || || ||| ||||||||| |||||| | |||
Sbjct 929586 TGAATTCCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAGCAATTTGGCCATTG 929527
Query 48753 ATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCG 48812
||| | || | ||| ||| |||| || ||||||||||||||||| |||||| ||| ||
Sbjct 929526 ATTCTTAATAAATAAGATCTTTCTAAAGTTTTAAAACCAAAATAATTGTATTGAAAATCT 929467
Query 48813 TTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTTT------------ATATACT 48860
|||||| || ||| | ||||| | || |||| ||| ||| ||
Sbjct 929466 CTATCATAAACAATAGCACTATTTAATACATCTTTATTTTTTTCAACAATTTGATAAACG 929407
Query 48861 ACATC------CATTACATTTTTTGATATAATTGATTCCT---TGTAAAGATCT---TC- 48907
|||| |||| | |||| || | || ||| | | |||| || | ||
Sbjct 929406 TCATCACTAATCATTGGAGATTTTAATCCATTTTTTTCATTAATATAAAAATATAAATCA 929347
Query 48908 --TACAACATCACTAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTA 48965
| ||| | | |||| |||||| |||| |||||| | ||| || || | |||||
Sbjct 929346 GAAATAACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAATTGGAAATTGCAATTCTT 929287
Query 48966 GCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGT-ACTAGATATTTCTGCTGC 49024
||||| ||| | |||||||| |||||||| || || ||| | | | || |||| || ||
Sbjct 929286 GCAGCCAATGTTGCATAATCAGGATGAATAGTAGT-CATATAAGCACATGTTTCAGCAGC 929228
Query 49025 TAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCATTGC 49084
|| |||| ||||| ||||||| || ||| ||| | || ||| | | | ||
Sbjct 929227 CAAATTATCCAATTCAATAGTAGTAACCCCTTCATAAACACCAGAAATGATTCTTTGTGT 929168
Query 49085 TATATTTACTGGATCTATATGATCCATATCCAGTCCATAACATAAtttttttATTCTAGA 49144
||| || ||||| ||||| | ||||| |||||||||||| | |||||||||
Sbjct 929167 AATAGAAACAGGATCAATATGGTTTGGATCCAAACCATAACATAATCTGGCTATTCTAGA 929108
Query 49145 TGTAATTTTATCAAACATTATATTCTCTTTACGACCGTCACGTTTTATAA 49194
|| ||||||||||| | ||||| |||||||| | ||||||||
Sbjct 929107 AGTGATTTTATCAAATTGAACCGGTTCTTTCCGACCGTCTC-TTTTATAA 929059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108680551880
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