Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq17 114 1e-20 seq2 82.4 6e-11 >seq17 Length=834807 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||| || ||| ||||||||||| ||||| ||||| | | ||| | | || Sbjct 25733 CAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 25674 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| || ||||| ||||| |||| || ||||| || | |||| || || ||||| Sbjct 25673 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTC 25614 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 || || ||| ||| | | || || || | || || |||| ||||| || Sbjct 25613 TTGGATTTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGT 25554 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTGT 48771 ||| || ||||||||||| || ||||| |||||| ||| Sbjct 25553 TTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTGT 25516 >seq2 Length=821690 Score = 82.4 bits (90), Expect = 6e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||| || ||| ||||||||||| ||||| ||||| | | ||| | | || Sbjct 193851 CAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 193792 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||| || ||||| ||||| |||| || ||||| || | |||| || || ||||| Sbjct 193791 TTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTC 193732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937521074491