Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq17 141 8e-29
seq15 120 3e-22
seq2 118 9e-22
>seq17
Length=834807
Score = 141 bits (156), Expect = 8e-29
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|| |||||||| || || ||||| || || ||||||||||||||| ||| ||| ||
Sbjct 25518 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCT 25577
Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670
|| || || | | | || |||| |||||| |||||||| || | || ||
Sbjct 25578 TCTGACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGAC 25637
Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730
||||| ||| | |||||||| || ||||||||||||||| || |||| || | || ||
Sbjct 25638 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 25697
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||||||||||||||| || || || |||| || ||||| |||| ||
Sbjct 25698 AACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGG 25747
>seq15
Length=1932387
Score = 120 bits (132), Expect = 3e-22
Identities = 167/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609
|||||||||||| || || |||||||| || || || ||||| || ||| ||| |
Sbjct 1576643 AAAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATC 1576702
Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669
|||||| ||| | | | | ||||| || ||| ||||||||||| | || |||
Sbjct 1576703 TTCAGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGA 1576762
Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729
||||| ||| | |||||||| || ||||| |||||||| | |||| || | || ||
Sbjct 1576763 CCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTA 1576822
Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||| ||||| || || || || || | || || ||||| |||| |||||
Sbjct 1576823 CAACATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGGGAT 1576876
>seq2
Length=821690
Score = 118 bits (130), Expect = 9e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622
||||| ||||| ||||| ||||| || || ||| ||| ||| |||| || || |
Sbjct 193648 TTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCATC 193707
Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682
| | |||| |||||| |||||||| || | || || ||||| ||| |
Sbjct 193708 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 193767
Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742
|||||||| || ||||||||||||||| || |||| || | || || ||||||||||||
Sbjct 193768 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 193827
Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||| ||||| || |||| || ||||| |||| ||
Sbjct 193828 GAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGG 193865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425404711861443
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |