Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq17 141 8e-29 seq15 120 3e-22 seq2 118 9e-22 >seq17 Length=834807 Score = 141 bits (156), Expect = 8e-29 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 || |||||||| || || ||||| || || ||||||||||||||| ||| ||| || Sbjct 25518 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCT 25577 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | || |||| |||||| |||||||| || | || || Sbjct 25578 TCTGACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGAC 25637 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||| ||| | |||||||| || ||||||||||||||| || |||| || | || || Sbjct 25638 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 25697 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||||||||||||| || || || |||| || ||||| |||| || Sbjct 25698 AACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGG 25747 >seq15 Length=1932387 Score = 120 bits (132), Expect = 3e-22 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609 |||||||||||| || || |||||||| || || || ||||| || ||| ||| | Sbjct 1576643 AAAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATC 1576702 Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 |||||| ||| | | | | ||||| || ||| ||||||||||| | || ||| Sbjct 1576703 TTCAGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGA 1576762 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 ||||| ||| | |||||||| || ||||| |||||||| | |||| || | || || Sbjct 1576763 CCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTA 1576822 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||| ||||| || || || || || | || || ||||| |||| ||||| Sbjct 1576823 CAACATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGGGAT 1576876 >seq2 Length=821690 Score = 118 bits (130), Expect = 9e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622 ||||| ||||| ||||| ||||| || || ||| ||| ||| |||| || || | Sbjct 193648 TTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCATC 193707 Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682 | | |||| |||||| |||||||| || | || || ||||| ||| | Sbjct 193708 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 193767 Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742 |||||||| || ||||||||||||||| || |||| || | || || |||||||||||| Sbjct 193768 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 193827 Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||| ||||| || |||| || ||||| |||| || Sbjct 193828 GAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGG 193865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404711861443