Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq16 338 3e-88
>seq16
Length=1651669
Score = 338 bits (374), Expect = 3e-88
Identities = 474/656 (72%), Gaps = 17/656 (3%)
Strand=Plus/Minus
Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949
||||| | ||||| |||||| | ||||| | |||||| | |||||||||||||||||
Sbjct 930110 TTGGAGAAAATAATGTCCAATCTGAATTTTCTTTAACTTTTTGCATAAATAAATCTGGAA 930051
Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009
||||| ||| ||| |||||||| ||||| ||||||||||| || ||||| || |
Sbjct 930050 CCCACAAGGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTTTACCATGATTTTTCCGAA 929991
Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069
||| | |||||||||||||| ||||||||||||||||| | ||||||| |||
Sbjct 929990 TATCAATAAAATCAAAAATATCACTATGCCATGGTTCTAAATAAAGAGCAAAAGCACCAG 929931
Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129
|||||| ||||||||||| || ||||||||||| | |||||||||| | | |||||
Sbjct 929930 GTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTATTGAAAACTCTAATCATTG 929871
Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189
||| |||||| | ||| ||||||||| | | ||| | || ||||| ||||||||||
Sbjct 929870 GAATCAATCCATTAGAAGTTCCGTTTGTTCCAGCAATATATGAACCTGTTGATCTAATAT 929811
Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249
||| ||||| ||| ||||||||||| ||| ||||| ||||| ||| | |
Sbjct 929810 TATGAATATGAAGACCAATTCCACCAGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAG 929751
Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309
| || ||||||| | || |||| ||||||| | | | |||||| ||||| | ||
Sbjct 929750 TGTCATAAATTCCATCAATTGAATCATCTTTCATAGCAACAAGAAAACATGAAGACATTT 929691
Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCT--TC 26367
| | | || |||| ||| |||||||| || | ||||||||| |||||| | |
Sbjct 929690 GTGGTCTTGGAGTACCTGCATTGAATAATGTTGGAGAAGCATGAGTGAAATATCTTAATG 929631
Query 26368 AC-TCAAAGCTGTATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATAG 26426
|| ||||| |||||||||| | ||||| || |||| | | | || | ||| ||
Sbjct 929630 ACATCAAA---TTATAAGTTTCCAAAACTTTYTCAATATCATTACCATGAATTCCAACAG 929574
Query 26427 CTGTTCTTAACCACATATATTGAGGTCGTTCAATTACATTATTTTCCGCAT---CTCTAA 26483
| ||| | || || ||| |||| |||| || |||| | ||| ||| |
Sbjct 929573 CAACTCTCATAATCAAATGTTGTGGTCTTTCA---GCA--ATTTGGC-CATTGATTCTTA 929520
Query 26484 TCAAATAAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTG-AAATCTCT 26538
||||||||| ||||||||||||| || |||||||||| | |||| ||||||||
Sbjct 929519 ATAAATAAGATCTTTCTAAAGTTTTAAAACCAAAATAATTGT-ATTGAAAATCTCT 929465
Score = 105 bits (116), Expect = 3e-18
Identities = 284/425 (67%), Gaps = 12/425 (3%)
Strand=Plus/Minus
Query 24695 GTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGAT 24754
||||| | || ||||| || |||||||| || ||| |||||||||||||| ||
Sbjct 931287 GTTCTCAAGTAGTACATACCTGTTTTCAAACCTTTAGACCACCCGTAAAAATGCATGGAG 931228
Query 24755 GTTAGTTTTGCAATGTTTGCTG--ATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAA 24812
|| | ||| | ||| ||| | || | || ||||| || |||| ||| ||
Sbjct 931227 GTCAATTTACCCATGGTTGGGGCCATGATGTGAAT--GTTCAAAGAATGAGATTGATCAA 931170
Query 24813 CAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTG 24872
|||| | ||| |||||||| | ||| ||||| ||||| ||| | || || | |
Sbjct 931169 TAAAAGCTGATCTGTCTGCAGCCATGTCGATGATGGTTTTTTGCGACAATTCCCAAACGG 931110
Query 24873 TTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTT 24932
||||||| ||||| | || ||||| ||| | || ||||| || || || |
Sbjct 931109 TTTTGTACAAGTCTTTAAGTTCTTGAGGAATGTTTGGCAAATGTTGAATAGACCCGTTGT 931050
Query 24933 CTCTCAATAGA-TTCAATCTCATATTCGGTGTCCAAAGATT---AATTTTTTCAAGATCT 24988
| ||||| || || |||| | |||| || ||| || | ||| ||||
Sbjct 931049 -TAGCAATAATGTTTGATTTCATGG-CATCGTCCCAA-ATTCCCAAATCAACCAA-ATCT 930994
Query 24989 CTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAG 25048
|||| ||||| | || | || ||||| ||||||||| |||||| | | |
Sbjct 930993 CTAAGCAAGTATGGGTTCACAATTTGGAATTCCCCAGACAAAGTTCTTCTAGAGTACATG 930934
Query 25049 TTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTT 25108
|||||||| |||||||| ||||||||||| | || |||||||| ||||| || || |||
Sbjct 930933 TTTGAAGTAAATGGTTCGAAACATTCATTGTAACCCAAGATTTGCGAAGTTGAAGCCGTT 930874
Query 25109 GGCAT 25113
|||||
Sbjct 930873 GGCAT 930869
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039947573275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |