Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq16 338 3e-88 >seq16 Length=1651669 Score = 338 bits (374), Expect = 3e-88 Identities = 474/656 (72%), Gaps = 17/656 (3%) Strand=Plus/Minus Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949 ||||| | ||||| |||||| | ||||| | |||||| | ||||||||||||||||| Sbjct 930110 TTGGAGAAAATAATGTCCAATCTGAATTTTCTTTAACTTTTTGCATAAATAAATCTGGAA 930051 Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009 ||||| ||| ||| |||||||| ||||| ||||||||||| || ||||| || | Sbjct 930050 CCCACAAGGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTTTACCATGATTTTTCCGAA 929991 Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069 ||| | |||||||||||||| ||||||||||||||||| | ||||||| ||| Sbjct 929990 TATCAATAAAATCAAAAATATCACTATGCCATGGTTCTAAATAAAGAGCAAAAGCACCAG 929931 Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129 |||||| ||||||||||| || ||||||||||| | |||||||||| | | ||||| Sbjct 929930 GTCTTTTATTACCACCTTGATCAACATATCTTGCAGTATTATTGAAAACTCTAATCATTG 929871 Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189 ||| |||||| | ||| ||||||||| | | ||| | || ||||| |||||||||| Sbjct 929870 GAATCAATCCATTAGAAGTTCCGTTTGTTCCAGCAATATATGAACCTGTTGATCTAATAT 929811 Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249 ||| ||||| ||| ||||||||||| ||| ||||| ||||| ||| | | Sbjct 929810 TATGAATATGAAGACCAATTCCACCAGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAG 929751 Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309 | || ||||||| | || |||| ||||||| | | | |||||| ||||| | || Sbjct 929750 TGTCATAAATTCCATCAATTGAATCATCTTTCATAGCAACAAGAAAACATGAAGACATTT 929691 Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCT--TC 26367 | | | || |||| ||| |||||||| || | ||||||||| |||||| | | Sbjct 929690 GTGGTCTTGGAGTACCTGCATTGAATAATGTTGGAGAAGCATGAGTGAAATATCTTAATG 929631 Query 26368 AC-TCAAAGCTGTATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATAG 26426 || ||||| |||||||||| | ||||| || |||| | | | || | ||| || Sbjct 929630 ACATCAAA---TTATAAGTTTCCAAAACTTTYTCAATATCATTACCATGAATTCCAACAG 929574 Query 26427 CTGTTCTTAACCACATATATTGAGGTCGTTCAATTACATTATTTTCCGCAT---CTCTAA 26483 | ||| | || || ||| |||| |||| || |||| | ||| ||| | Sbjct 929573 CAACTCTCATAATCAAATGTTGTGGTCTTTCA---GCA--ATTTGGC-CATTGATTCTTA 929520 Query 26484 TCAAATAAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTG-AAATCTCT 26538 ||||||||| ||||||||||||| || |||||||||| | |||| |||||||| Sbjct 929519 ATAAATAAGATCTTTCTAAAGTTTTAAAACCAAAATAATTGT-ATTGAAAATCTCT 929465 Score = 105 bits (116), Expect = 3e-18 Identities = 284/425 (67%), Gaps = 12/425 (3%) Strand=Plus/Minus Query 24695 GTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGAT 24754 ||||| | || ||||| || |||||||| || ||| |||||||||||||| || Sbjct 931287 GTTCTCAAGTAGTACATACCTGTTTTCAAACCTTTAGACCACCCGTAAAAATGCATGGAG 931228 Query 24755 GTTAGTTTTGCAATGTTTGCTG--ATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAA 24812 || | ||| | ||| ||| | || | || ||||| || |||| ||| || Sbjct 931227 GTCAATTTACCCATGGTTGGGGCCATGATGTGAAT--GTTCAAAGAATGAGATTGATCAA 931170 Query 24813 CAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTG 24872 |||| | ||| |||||||| | ||| ||||| ||||| ||| | || || | | Sbjct 931169 TAAAAGCTGATCTGTCTGCAGCCATGTCGATGATGGTTTTTTGCGACAATTCCCAAACGG 931110 Query 24873 TTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTT 24932 ||||||| ||||| | || ||||| ||| | || ||||| || || || | Sbjct 931109 TTTTGTACAAGTCTTTAAGTTCTTGAGGAATGTTTGGCAAATGTTGAATAGACCCGTTGT 931050 Query 24933 CTCTCAATAGA-TTCAATCTCATATTCGGTGTCCAAAGATT---AATTTTTTCAAGATCT 24988 | ||||| || || |||| | |||| || ||| || | ||| |||| Sbjct 931049 -TAGCAATAATGTTTGATTTCATGG-CATCGTCCCAA-ATTCCCAAATCAACCAA-ATCT 930994 Query 24989 CTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAG 25048 |||| ||||| | || | || ||||| ||||||||| |||||| | | | Sbjct 930993 CTAAGCAAGTATGGGTTCACAATTTGGAATTCCCCAGACAAAGTTCTTCTAGAGTACATG 930934 Query 25049 TTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTT 25108 |||||||| |||||||| ||||||||||| | || |||||||| ||||| || || ||| Sbjct 930933 TTTGAAGTAAATGGTTCGAAACATTCATTGTAACCCAAGATTTGCGAAGTTGAAGCCGTT 930874 Query 25109 GGCAT 25113 ||||| Sbjct 930873 GGCAT 930869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039947573275