Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq16 208 9e-49 seq14 120 4e-22 >seq16 Length=1651669 Score = 208 bits (230), Expect = 9e-49 Identities = 494/739 (67%), Gaps = 22/739 (3%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || ||| | || |||| || || || || ||||||| ||| ||||||| ||| Sbjct 930218 TGGTATGCCATTTTGGAAGCACAAACAGAAACAGGTACACCATTTATTGTTTACAAAGAT 930277 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 ||||||||||| || |||||||| || |||||||| ||||| || ||| | || Sbjct 930278 GCTTGTAACAAAAAATCCAACCAAAAAAACTTGGGAACCATCAAATCATCCAATTTGTGT 930337 Query 75998 ACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATC 76057 |||||| | || || | ||||| || || || || ||||| || ||||| || || Sbjct 930338 TGTGAAATTGTGGAATATTCTGATAATGACGAAACTGCAGTTTGTAACTTGGCTTCCATT 930397 Query 76058 GCCCTTCCAAAGTATGTCAA------TGAAG------AGACTCGCACTTTTGATTATGAA 76105 || | ||| | | |||| |||| | |||| |||| | ||| || Sbjct 930398 GCTTTACCAGCTTTTATCAACGTTTCAGAAGAYAACCAAACTCAAACTTATAATTTCAAA 930457 Query 76106 AAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAAT 76165 ||| | |||||| || |||| | | || | ||| | ||| |||||||||| ||||| Sbjct 930458 AAATTGCATGAAGTCGCAAAAGTCATCACAAGAAACTTGAACAGAGTCATTGATAGAAAC 930517 Query 76166 TTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGT 76225 | ||||| || || ||||| |||| || || ||| |||| ||||| |||| ||| || Sbjct 930518 TACTATCCAGTGGAAACTGCAAGAAACTCAAACATGAGACATAGACCAATTGCTTTAGGG 930577 Query 76226 GTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTGATTCAGATGAAGC 76284 ||||||||| | || || ||||| || || | | |||||||||| || ||||| Sbjct 930578 GTTCAAGGTTTGGCCGACACTTTTATGCTTTTGAGAGTTC-CATTTGATTCTGAAGAAGC 930636 Query 76285 CAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTG 76344 || | | || || || || ||||| |||| ||||| | |||| || Sbjct 930637 TAAACAACTAAACATTCAAATTTTCGAAACATTGTACCACGCTGCTTTGGAAGCTTCCAA 930696 Query 76345 TGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGG 76404 ||| |||| | | ||||| | || | | ||| | || ||||| || |||||||| Sbjct 930697 CGAAATGGCCGTGGAGGAAGGTCCATACCAATCGTTTCAAGGATCTCCAGCTTCCCAAGG 930756 Query 76405 GGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA--AGCTCAACTACGACTGGGATGTT 76462 ||| | || || ||||||||| | | | ||| || || | || ||||| | Sbjct 930757 GGTTTTGCAATTCGATATGTGGAACAGAG-CTCCATCAGATC-TTTGGGAATGGGAATCT 930814 Query 76463 CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGC 76520 | | ||| |||| | | | ||| | | ||| || || | |||| || |||| Sbjct 930815 TTGAGAGAAAAAATCATGAAAACAGGTTTAAGAAAC--TCATTGCTATTGGCTCCTATGC 930872 Query 76521 CAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAA 76580 |||| || || || | |||||||||||| | |||||||| || ||||||| || ||| Sbjct 930873 CAACGGCTTCAACTTCGCAAATCTTGGGTTACAATGAATGTTTCGAACCATTTACTTCAA 930932 Query 76581 ACATCTACCTGAGAAGAAC 76599 |||| ||| |||||||| Sbjct 930933 ACATGTACTCTAGAAGAAC 930951 >seq14 Length=1659880 Score = 120 bits (132), Expect = 4e-22 Identities = 340/511 (67%), Gaps = 11/511 (2%) Strand=Plus/Minus Query 64713 TTGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAA 64769 ||||||||| |||||| ||||| | ||||||||| | |||| ||||| | | |||| Sbjct 313262 TTGGACTGCAGAAGAAATTGATCTATCCAAAGATTTGCACGATTGGAATAACAGAATGAA 313203 Query 64770 TGAAAATGAAAAGAAATTCATAAAGTACA-TCCTGGCATTCTTTGCTGGGTCCGATGGAA 64828 ||||||||||| ||||| | ||| | | | ||||| ||||| | || ||||||| Sbjct 313202 TGAAAATGAAAGATTTTTCATTA-GTAGAGTTTTAGCATTTTTTGCAGCTTCTGATGGAA 313144 Query 64829 TTGTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCT 64888 ||||| ||| ||| | | | |||||| | |||||||| || ||||| | Sbjct 313143 TTGTTAATGAAAATTTGGTTGAAAATTTTAGTGCAGAAGTGCAAATTCCTGAAGCCAAAT 313084 Query 64889 CATTCTACGCATATCAATGCCATAAT-GAAATGGTTCATGGCGAAACATATTCAAAATTG 64947 || |||| || |||| || || |||| |||| | ||||| |||||| ||| Sbjct 313083 GTTTTTACGGATTTCAA-ATTATGATGGAAAACATTCACAGTGAAACTTATTCACTTTTG 313025 Query 64948 ATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACT 65007 ||||| | || || || ||| | |||| | ||||| | ||||| |||| Sbjct 313024 ATTGATACTTATATCAAAGATCCAAAAGAAAGCGATTTTTTATTCAATGCCATTGAAACA 312965 Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG-TTTGACACAAAGTCTCG 65066 | || || | | ||||| ||||||| || | |||| || | || ||| | Sbjct 312964 ATTCCTCAAATCAAAGAAAAGGCAGAATGGGCTATTAGATGGATTCAAGACGAAGATGCA 312905 Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 || || || || | | | || ||||| |||||| ||| | ||||| || || || Sbjct 312904 CT-TTTTGCTGAAAGATTGGTGGCATTTGCTGCTGTGGAAGGTGTTTTCTTTTCTGGATC 312846 Query 65127 ATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAA 65185 || ||| || || | |||||||||||| ||| | |||||||| || || |||| Sbjct 312845 CTT-TGCTGCAATCTTTTGGTTGAAGAAAAAGGGGTTGATGCCAGGTTTAACTTTTTCAA 312787 Query 65186 ATGAACTTATTTCCCGAGATGAGGGTCTCCA 65216 ||||| | |||| ||||||| || || || Sbjct 312786 ATGAATTGATTTGTAGAGATGAAGGACTGCA 312756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569473228960