Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq14 288 1e-72
seq15 161 1e-34
seq17 159 5e-34
seq2 138 2e-27
>seq14
Length=1659880
Score = 288 bits (318), Expect = 1e-72
Identities = 641/947 (68%), Gaps = 22/947 (2%)
Strand=Plus/Plus
Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920
||||||| || || ||| |||| || ||||||||||| |||||| |||| || ||
Sbjct 312447 GCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATG 312506
Query 17921 AAATTCATAAAATCAAATGGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTAT 17980
| ||||||||||||||| || | || ||||||||||| | ||| |
Sbjct 312507 TTTTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTCGTTACCCAATGCAACC 312566
Query 17981 AATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGT 18040
||||||||||| || |||||||| |||||||| ||||||| | |||||| ||||
Sbjct 312567 AATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAAC 312626
Query 18041 AGTCTGAAAGGTAGAGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTATT 18100
| | |||||| ||||| || | || ||| || || ||| | ||| |
Sbjct 312627 AAAGATACAGGTAGTGCATCTTCAAAATATCTTTTTTCAATAGAAACTG---CTTCAGTA 312683
Query 18101 ATGTTTATTACCCTAGATTTTGG--CAA-TTTATTAATTATGTGATTATAATATAATAAA 18157
||| || || | | |||||| || ||| || | || || |||| ||| |
Sbjct 312684 ATGATTCTTTCAGCAATTTTTGGATCAGGTTTGTTTTCCAAATG-TTGGAATA--ATAGA 312740
Query 18158 CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217
|| |||||||| || || | ||||||||||| | || ||||| || ||| |||||
Sbjct 312741 CATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAA 312800
Query 18218 CCGGGCATTATACCTCtttttttt-AGCCAAAATATCGATGCGAAACTACTAGAAAAGAA 18276
|| ||||| | ||| |||||| || | |||||| || | || || | |||||||||
Sbjct 312801 CCTGGCATCA-ACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAA 312859
Query 18277 TATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCA 18335
| ||| || || ||| || || || | ||||||||||||||| || | || ||
Sbjct 312860 AACACCTTCCACAGCA-GCAAATGCCACCAATCTTTCAGCAAAAA-GTGCATCTTCGTCT 312917
Query 18336 -GTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCA 18394
| |||||| | ||||||||| | | || || || | || || |||
Sbjct 312918 TGAATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCA 312977
Query 18395 TTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATAC 18454
|| || ||| ||| ||||||| | |||||| |||||||| || || || | |||||
Sbjct 312978 TTGAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGAATAA 313037
Query 18455 ATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGA 18514
||||| || ||| ||||||| || ||||| | ||||| || | || || |||
Sbjct 313038 GTTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGA 313097
Query 18515 TATTGAATCTC-GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGA 18573
||| | || || |||||| |||| |||||||| |||||||| || || |||| ||
Sbjct 313098 ATTTGCACTTCTGCACTAAAAT-TTTCAACCAAATTTTCATTAACAATTCCATCAGAAGC 313156
Query 18574 TGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGTT--- 18630
||| |||||||| ||||| |||||||| | ||||||| || || | ||||
Sbjct 313157 TGCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGTTATT 313216
Query 18631 CCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGC 18690
||| || | | |||||| |||||||||| |||||| | ||||||||||| | ||| ||
Sbjct 313217 CCAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGC 313276
Query 18691 CTGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAATAATATATATCGTTTATA 18750
|||| || || |||| || | || || || ||||| || | | ||| | | |
Sbjct 313277 ACGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCTTCTTTT 313336
Query 18751 ATTTTTTATTAACATAGGTTCTTCCATTTTTCTAATATTATTAATTT 18797
|||| | |||| ||||| | |||||| ||| | |||||||
Sbjct 313337 GTTTTCCACCAACAAGGGTTCGT--TTTTTTCAAATTCTTTTAATTT 313381
>seq15
Length=1932387
Score = 161 bits (178), Expect = 1e-34
Identities = 178/235 (76%), Gaps = 4/235 (2%)
Strand=Plus/Plus
Query 155817 AATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAA 155876
|| ||||||||||| || |||||||||||||||| || || || || || |||||||||
Sbjct 1576641 AAAAAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAA 1576700
Query 155877 GATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCA 155936
||| || | || ||||| || || || ||||| ||||| || || || |||
Sbjct 1576701 TCTTCAGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCA 1576760
Query 155937 GAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGAT 155996
|| |||||||||||||| | ||| ||||| ||| | ||||| ||||||||| || ||
Sbjct 1576761 GACCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGAC 1576820
Query 155997 TATAATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| | | ||||||| ||| | |||||||||||||| || ||||| ||||| ||
Sbjct 1576821 TACA--ACATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGG 1576873
Score = 159 bits (176), Expect = 5e-34
Identities = 175/231 (76%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || |||||||||||||||| ||||| || || || |||||||| ||
Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || || || ||||| |||||||| || || ||||| |||
Sbjct 1576935 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAA 1576994
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||| | ||| ||||| ||| | ||||| ||||||||| || || || |
Sbjct 1576995 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACA-- 1577052
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| ||||||| ||| | |||||||||||||| || ||||| ||||| ||||
Sbjct 1577053 ACATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGGTG 1577103
>seq17
Length=834807
Score = 159 bits (176), Expect = 5e-34
Identities = 179/238 (75%), Gaps = 1/238 (0%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || ||||||| ||||| || ||||| ||||| || ||||| ||| |
Sbjct 25518 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCT 25577
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | |||| || || ||| ||||| ||||| |||||||| || || || ||
Sbjct 25578 TCTGACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGAC 25637
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| ||||| || | |||||| |||||||| || || ||
Sbjct 25638 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 25697
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT-GTAAAA 156056
|| || ||||| | || |||||||| || || ||||| ||||| ||| ||||||
Sbjct 25698 AACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGGTGGTAAAA 25755
>seq2
Length=821690
Score = 138 bits (152), Expect = 2e-27
Identities = 163/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | ||||| || ||||| || ||||| || ||||||||||| ||| || | ||
Sbjct 193648 TTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCATC 193707
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
||||| ||| ||||| ||||| |||||||| || || || || ||||||||||||
Sbjct 193708 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 193767
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| ||||| || | |||||| |||||||| || || || || || |||
Sbjct 193768 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 193827
Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTGT 156052
|| | || |||||||| || || ||||| ||||| |||||
Sbjct 193828 GAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGGTGT 193868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871844477200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |