Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq14 199 8e-46
seq2 165 2e-35
seq17 161 2e-34
seq15 138 2e-27
>seq14
Length=1659880
Score = 199 bits (220), Expect = 8e-46
Identities = 539/827 (65%), Gaps = 18/827 (2%)
Strand=Plus/Plus
Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATATAATAA 49651
||||||||||||||| || ||| ||||||||||| |||| || |||||
Sbjct 312512 CATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTCGTTACCCAATGCAACCAATAA 312571
Query 49652 TCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATTT 49711
|||||| || |||||||| |||||||| ||| || || |||||| || || ||
Sbjct 312572 TCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAACAAAGA 312631
Query 49712 AAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatcat 49771
| |||| |||||| |||| | || |||||| || || |||| |||| || |
Sbjct 312632 TACAGGTAGTGCATCTTCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAATGATTCT 312691
Query 49772 aattatattattttttgataa--tttatatttaatatgattcgcatatattaaACATGCA 49829
|| |||||| ||| | ||| | || | ||| | | | ||| || |||||||
Sbjct 312692 --TTCAGCAATTTTTGGATCAGGTTTGTTTTCCAAATGTT--GGA-ATAATAGACATGCA 312746
Query 49830 AAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGC 49889
||||| ||||| | || || || ||| | || |||||||| ||||||||| ||||||
Sbjct 312747 AAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACCTGGC 312806
Query 49890 ATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCC 49949
|| || || | || || | |||||| |||| ||||| | ||||||||| | |||
Sbjct 312807 ATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAAACACCT 312866
Query 49950 TCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATATCCAA 50009
|| ||| |||||||| | | |||| | |||| | | | || ||| |||||
Sbjct 312867 TCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTGAATCCAT 312926
Query 50010 TTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAAT 50069
| |||||||| ||||| |||| |||||| ||| || |||| || || || |||||
Sbjct 312927 CTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATTGAATAAA 312986
Query 50070 TCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTCA--- 50126
|| |||| | || || | ||||| |||||
Sbjct 312987 AAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGAATAAGTTTCACTG 313046
Query 50127 -GAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTG 50185
|||||| |||||| ||||||||| ||||| | | ||||| | | ||
Sbjct 313047 TGAATGT----TTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTTCAGGAATTTG 313102
Query 50186 AACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAA 50245
||||| | | || |||||| ||||| ||| ||||| |||||||| ||||| ||
Sbjct 313103 CACTTCTGCACTAAAATTTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCTGCAAA 313162
Query 50246 GAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTT---TTAAATTTTCCCAAGA 50302
||||||||||| |||| ||| | ||||||| || | || || | ||||
Sbjct 313163 AAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATC 313222
Query 50303 TTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTTTT 50362
| | ||| || |||| ||| | ||||||| |||||||| || ||| | | |||
Sbjct 313223 GTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTTCTGCACGTTT 313282
Query 50363 ATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATC 50409
||| ||| | || ||| || || || ||||| | ||| |||
Sbjct 313283 ATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATC 313329
>seq2
Length=821690
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||||| ||||||||| | | || || ||||| | ||| | ||||| || |
Sbjct 193876 GTTCAATAACACCACCTCTCAATCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGT 193817
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| || ||||| || |||| |||| ||||||||||||||||||||||| ||||| ||||
Sbjct 193816 TGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTT 193757
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
| |||||||| || |||||||| ||||| ||||| ||| || ||| || | || |
Sbjct 193756 GGTCAGGTGGAATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGG 193697
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
| ||||| |||||||| || || || ||||||||||| ||||| | |||
Sbjct 193696 AAGATTCGACTTCTAGGGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 193648
>seq17
Length=834807
Score = 161 bits (178), Expect = 2e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || ||||| | || | ||||| || || || |||||
Sbjct 25748 ACCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGA 25689
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| |||| ||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct 25688 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 25629
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| |||||||| ||||| ||||| ||| ||||| |||| || || ||||| ||
Sbjct 25628 AATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAAC 25569
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||| | |||||||||||||| || || ||||||| || || ||||| ||
Sbjct 25568 TTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTT 25518
>seq15
Length=1932387
Score = 138 bits (152), Expect = 2e-27
Identities = 172/236 (73%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| |||||||| | | || |||||||| | || | ||| || ||| || || ||
Sbjct 1576876 ATCCCACCTCTCAATCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCC 1576817
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || |||| | || ||||| ||||||||||||||||| ||||| ||||| || |||
Sbjct 1576816 GACAAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGT 1576757
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| ||||| || || || || || || | ||||| |||||
Sbjct 1576756 GGAATCCCCTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCG 1576697
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTATT 192542
||||| | ||| ||||| || ||||| |||||||||| || || |||||||| ||
Sbjct 1576696 ACTTCCAAAGTGATGGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCATTTTTTT 1576641
Score = 132 bits (146), Expect = 9e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || |||||||| | || | ||| || ||| || || || ||
Sbjct 1577102 ACCACCTCTCAATCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGA 1577043
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
|| |||| | || ||||| ||||||||||||||||| ||||| ||||| || |||||
Sbjct 1577042 CAAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 1576983
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| |||||||| ||||| || || || || || || | || || || || ||
Sbjct 1576982 AATCCCTTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 1576923
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||| | ||| |||||||| ||||| |||||||||| || || |||||
Sbjct 1576922 TTCCAAAGTGATGGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479785567950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |