Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq14 232 1e-55
seq17 170 3e-37
seq2 163 5e-35
seq15 150 3e-31
>seq14
Length=1659880
Score = 232 bits (256), Expect = 1e-55
Identities = 379/542 (70%), Gaps = 7/542 (1%)
Strand=Plus/Plus
Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890
|||||| || ||||||||| ||||||| || || |||||||||||| | || || ||
Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508
Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATATAA 38950
| ||||||||||||||| || ||| ||||||||||| |||| || ||
Sbjct 312509 TTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTCGTTACCCAATGCAACCAA 312568
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
||||||||| || |||||||| |||||||| ||| || || |||||| || || ||
Sbjct 312569 TAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAACAA 312628
Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat 39070
| |||| |||||| |||| | || |||||| || || |||| |||| ||
Sbjct 312629 AGATACAGGTAGTGCATCTTCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAATGAT 312688
Query 39071 cataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAACAT 39128
| || |||||| ||| | ||| | || | ||| | | | ||| || ||||
Sbjct 312689 TCT--TTCAGCAATTTTTGGATCAGGTTTGTTTTCCAAATGTT--GGA-ATAATAGACAT 312743
Query 39129 GCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 39188
|||||||| ||||| | ||||| || ||| | || |||||||| ||||||||| |||
Sbjct 312744 GCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACCT 312803
Query 39189 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 39248
||||| || || | || || | |||||| |||| ||||| | ||||||||| | |
Sbjct 312804 GGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAAACA 312863
Query 39249 CCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATC 39308
|| |||||| |||||||| | | |||| | |||| | | | || ||| ||||
Sbjct 312864 CCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTGAATC 312923
Query 39309 CAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT 39368
|| | || ||||| ||||| |||| |||||| ||| || |||| || || || |||
Sbjct 312924 CATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATTGAAT 312983
Query 39369 AA 39370
||
Sbjct 312984 AA 312985
>seq17
Length=834807
Score = 170 bits (188), Expect = 3e-37
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || || || ||||| | || | ||||| ||| || || || ||
Sbjct 25748 ACCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGA 25689
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
|||| || | || |||||||||||||||||||| || ||||| ||||||||||||||
Sbjct 25688 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 25629
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| |||||||| ||||| ||||| ||| ||||| ||||| || || ||||| ||
Sbjct 25628 AATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAAC 25569
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||| | |||||||||||||| || || ||||||| ||| || ||||| ||
Sbjct 25568 TTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTT 25518
>seq2
Length=821690
Score = 163 bits (180), Expect = 5e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|||| ||||||||| | || || || ||||| | ||| | ||||| ||| || ||
Sbjct 193871 ATAACACCACCTCTCAATCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAG 193812
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || |||| || | || |||||||||||||||||||| || ||||| |||||||||
Sbjct 193811 TCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCA 193752
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || |||||||| ||||| ||||| ||| || ||| || || || || |||
Sbjct 193751 GGTGGAATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAAGAT 193692
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054
|| |||||||| || || || ||||||||||| |||||
Sbjct 193691 TCGACTTCTAGGGTGATAGTCTTACCAGTTAAGGTTTT 193654
>seq15
Length=1932387
Score = 150 bits (166), Expect = 3e-31
Identities = 175/236 (74%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| |||||||| | || || |||||||| | || | ||| || || || || ||
Sbjct 1576876 ATCCCACCTCTCAATCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCC 1576817
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| |||| || |||| ||||| |||||||||||||| || ||||| |||||||| |||
Sbjct 1576816 GACAAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGT 1576757
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| ||||| || || || || || || || ||||| |||||
Sbjct 1576756 GGAATCCCCTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCG 1576697
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATT 172075
||||| | ||| ||||| || ||||| |||||||||| ||| || |||||||| ||
Sbjct 1576696 ACTTCCAAAGTGATGGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCATTTTTTT 1576641
Score = 145 bits (160), Expect = 1e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || || |||||||| | || | ||| || || || || || ||
Sbjct 1577102 ACCACCTCTCAATCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGA 1577043
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
|||| || |||| ||||| |||||||||||||| || ||||| |||||||| |||||
Sbjct 1577042 CAAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 1576983
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| |||||||| ||||| || || || || || || || || || || || ||
Sbjct 1576982 AATCCCTTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 1576923
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||| | ||| |||||||| ||||| |||||||||| ||| || |||||
Sbjct 1576922 TTCCAAAGTGATGGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135807658600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |