Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq14 232 1e-55 seq17 170 3e-37 seq2 163 5e-35 seq15 150 3e-31 >seq14 Length=1659880 Score = 232 bits (256), Expect = 1e-55 Identities = 379/542 (70%), Gaps = 7/542 (1%) Strand=Plus/Plus Query 38831 TTTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAA 38890 |||||| || ||||||||| ||||||| || || |||||||||||| | || || || Sbjct 312449 TTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAAGAGATGTT 312508 Query 38891 ATTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATATAA 38950 | ||||||||||||||| || ||| ||||||||||| |||| || || Sbjct 312509 TTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTCGTTACCCAATGCAACCAA 312568 Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010 ||||||||| || |||||||| |||||||| ||| || || |||||| || || || Sbjct 312569 TAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCATTCATTCCTAACAA 312628 Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat 39070 | |||| |||||| |||| | || |||||| || || |||| |||| || Sbjct 312629 AGATACAGGTAGTGCATCTTCAAAATATCTTTTTTCAATAGAAACTGCTTCAGTAATGAT 312688 Query 39071 cataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAACAT 39128 | || |||||| ||| | ||| | || | ||| | | | ||| || |||| Sbjct 312689 TCT--TTCAGCAATTTTTGGATCAGGTTTGTTTTCCAAATGTT--GGA-ATAATAGACAT 312743 Query 39129 GCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 39188 |||||||| ||||| | ||||| || ||| | || |||||||| ||||||||| ||| Sbjct 312744 GCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACCT 312803 Query 39189 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 39248 ||||| || || | || || | |||||| |||| ||||| | ||||||||| | | Sbjct 312804 GGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGAAAAGAAAACA 312863 Query 39249 CCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATC 39308 || |||||| |||||||| | | |||| | |||| | | | || ||| |||| Sbjct 312864 CCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGCATCTTCGTCTTGAATC 312923 Query 39309 CAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT 39368 || | || ||||| ||||| |||| |||||| ||| || |||| || || || ||| Sbjct 312924 CATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATTGAAT 312983 Query 39369 AA 39370 || Sbjct 312984 AA 312985 >seq17 Length=834807 Score = 170 bits (188), Expect = 3e-37 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || || || ||||| | || | ||||| ||| || || || || Sbjct 25748 ACCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGA 25689 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 |||| || | || |||||||||||||||||||| || ||||| |||||||||||||| Sbjct 25688 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 25629 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || |||||||| ||||| ||||| ||| ||||| ||||| || || ||||| || Sbjct 25628 AATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAAC 25569 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||| | |||||||||||||| || || ||||||| ||| || ||||| || Sbjct 25568 TTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTT 25518 >seq2 Length=821690 Score = 163 bits (180), Expect = 5e-35 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 |||| ||||||||| | || || || ||||| | ||| | ||||| ||| || || Sbjct 193871 ATAACACCACCTCTCAATCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAG 193812 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || || |||| || | || |||||||||||||||||||| || ||||| ||||||||| Sbjct 193811 TCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCA 193752 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || |||||||| ||||| ||||| ||| || ||| || || || || ||| Sbjct 193751 GGTGGAATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAAGAT 193692 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054 || |||||||| || || || ||||||||||| ||||| Sbjct 193691 TCGACTTCTAGGGTGATAGTCTTACCAGTTAAGGTTTT 193654 >seq15 Length=1932387 Score = 150 bits (166), Expect = 3e-31 Identities = 175/236 (74%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || |||||||| | || || |||||||| | || | ||| || || || || || Sbjct 1576876 ATCCCACCTCTCAATCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCC 1576817 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || |||| || |||| ||||| |||||||||||||| || ||||| |||||||| ||| Sbjct 1576816 GACAAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGT 1576757 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||| || || || || || || || ||||| ||||| Sbjct 1576756 GGAATCCCCTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCG 1576697 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATT 172075 ||||| | ||| ||||| || ||||| |||||||||| ||| || |||||||| || Sbjct 1576696 ACTTCCAAAGTGATGGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCATTTTTTT 1576641 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || || |||||||| | || | ||| || || || || || || Sbjct 1577102 ACCACCTCTCAATCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGA 1577043 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 |||| || |||| ||||| |||||||||||||| || ||||| |||||||| ||||| Sbjct 1577042 CAAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 1576983 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || |||||||| ||||| || || || || || || || || || || || || Sbjct 1576982 AATCCCTTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 1576923 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||| | ||| |||||||| ||||| |||||||||| ||| || ||||| Sbjct 1576922 TTCCAAAGTGATGGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135807658600