Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq16 244 3e-59 seq14 145 2e-29 seq2 111 5e-19 >seq16 Length=1651669 Score = 244 bits (270), Expect = 3e-59 Identities = 652/989 (66%), Gaps = 21/989 (2%) Strand=Plus/Minus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 |||| || |||| ||||| || ||||| || | | || ||||| ||||| |||| Sbjct 930398 CAATGGAAGCCAAGTTACAAACTGCAGTTTCGTCATTATCAGAATATTCCACAATTTCAC 930339 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 | |||| || || |||||||| || || || || ||||| ||||| ||||||||| Sbjct 930338 AACACAAATTGGATGATTTGATGGTTCCCAAGTTTTTTTGGTTGGATTTTTTGTTACAAG 930279 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCC 155766 |||| ||||| | ||| |||| || ||||| || | ||||| |||| ||| || Sbjct 930278 CATCTTTGTAAACAATAAATGGTGTACCTGTTTCTGTTTGTGCTTCCAAAATGGCATACC 930219 Query 155767 AGAGGTCACGGGCATTAATTTGCTTGTTGTA--TCTGCCTTCCGACTCATATTTCATATA 155824 | | | | || |||||| || || || ||| ||||| ||||||| | || Sbjct 930218 ATAATTTTTGAGCTTTAATTG--TTTTTCTACCTCTTCCTTCTTGAACATATTTGTTGTA 930161 Query 155825 CAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG----CACTTATCGGGGC 155880 | || |||| | ||| ||| |||||||| ||||| ||||| || Sbjct 930160 TAATTTTTCAAAATCTTTACCATAAACATCACTCAAACCAGGAGCTTCACTT----GGAG 930105 Query 155881 AAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAA 155940 |||| | | |||| | ||| | | || | |||||||| ||| |||| | Sbjct 930104 AAAATAATGTCCAATCTGAATTTTCTTTAACTTTTTGCATAAATAAATCTGGAACCCACA 930045 Query 155941 TAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTA 156000 ||| || | || ||||| | || || | || ||||| ||||| | || | Sbjct 930044 AGGCAGGAAACAAATCTCTTGCTCTAATTTCTTCTTTACCATGATTTTTCCGAATATCAA 929985 Query 156001 AGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCT 156060 || || ||||||| ||| ||| || | ||| | ||||||| |||| || | Sbjct 929984 TAAAATCAAAAATATCACTATGCCATGGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTT 929925 Query 156061 TG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAA 156117 | ||||| ||||| ||||| | ||||| |||||||| || | | ||| ||||| | Sbjct 929924 TATTACCACCTTGATCAACATATCTTGCAGTATTATTGAAAACTCTAATCATTGGAATCA 929865 Query 156118 TACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAA 156177 ||||| ||||| || || ||||| ||||| ||||| | ||| | || |||||||| Sbjct 929864 ATCCATTAGAAGTTCCGTTTGTTCCAGCAATATATGAACCTGTTGATCTAATATTATGAA 929805 Query 156178 TATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGA 156237 |||| || ||||| ||||| | ||||||||| ||| ||||| |||| ||| | Sbjct 929804 TATGAAGACCAATTCCACCAGCAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTGTCAT 929745 Query 156238 AAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTC 156297 |||| || ||||| |||||||||| ||| | | ||| | || ||| | ||| |||| Sbjct 929744 AAATTCCATCAATTGAATCATCTTTCATAGCAACAAGAAAACATGAAGACATTTGTGGTC 929685 Query 156298 GTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTATTAGACATA 156356 ||| || || || ||||||| ||| || | |||||| | ||||| |||| | ||||| Sbjct 929684 TTGGAGTACCTGCATTGAATAATGTTGGAGAAGCATGAGTGAAATATCTTAAT-GACATC 929626 Query 156357 TAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTC 156416 ||| || || ||| || || |||| || | || ||||| | | || || ||| Sbjct 929625 AAATTATAAGTTTCCAAAACTTTYTCAATATCATTACCATGAATTCCAACAGCAACTCTC 929566 Query 156417 ATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGCGT 156476 || || ||| || || | || |||| |||| |||| | | || | | | Sbjct 929565 ATAATCAAATGTTGTGGTCTTTCAGCAATTTGGCCATTGATTCTTAATAAATAAGATCTT 929506 Query 156477 TCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAATCAAT--CATTT 156534 || | ||||||||| || ||||||| | ||||||| | | ||| |||| || | Sbjct 929505 TCTAAAGTTTTAAAACCAAAATAATTGTATTGAAAATCTCTATCATAAACAATAGCACT- 929447 Query 156535 CATCTAACTCAACCTGATATTTTTCCACA 156563 || ||| || | | || |||||| ||| Sbjct 929446 -ATTTAATACATCTTTATTTTTTTCAACA 929419 Score = 95.1 bits (104), Expect = 4e-14 Identities = 221/328 (67%), Gaps = 8/328 (2%) Strand=Plus/Plus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||| ||| || ||| || ||||||| | |||| ||||| | ||||||||||| || Sbjct 996849 ATCGTAATGAACCATGATATCTTCCAAAGCTTTGACCAAACGTCTTTGAATATAACCCGT 996908 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | || |||||| ||||| |||||||| | ||| | | |||||||||||| ||||| || Sbjct 996909 TTCAGCTGTTTTCACAGCAGTATCAATCAAACCTTCTCTACCACCCATAGCGTGGAAAAA 996968 Query 302673 TAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCG 302730 | |||| ||| || | || | ||| || ||| |||| || ||||| | || Sbjct 996969 AAATTCTTGTGGT-GTCAAACCTCTCAAGTAA-GAGTTCTCCACAAAACCTTTAGATTCA 997026 Query 302731 GGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATA 302790 || || | ||| |||| ||| || || || || || | || | || | || ||| Sbjct 997027 GGAGAGTAATCGTCTTTGGAAAAATGAGGTAGTGTTCTATCAGCAAATCCAAAAGGAATA 997086 Query 302791 CGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAAT 302848 ||||| || || || || || |||| || | |||||| | ||| || |||| Sbjct 997087 CGCTTACCTTCGACAGATTGTTGACCCACACATGCGGACATCTGTGCAATGTTGATAAAC 997146 Query 302849 CACTGCCCTTGGAGCCAGCATTTACCAT 302876 || || || || || ||| | ||||| Sbjct 997147 GAC--CCTTTAGAACCTGCACTAACCAT 997172 >seq14 Length=1659880 Score = 145 bits (160), Expect = 2e-29 Identities = 338/503 (67%), Gaps = 9/503 (2%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 || ||||| || |||| | ||| ||| ||| || || || || ||||| || || Sbjct 1128397 CTGTCAAATCTCCCAGGTCTCATTAGGGCTTTGTCCAAAATGTCTGCCCTGTTAGTACCT 1128456 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAA--ATTTGAT 288967 ||||| |||||||| ||| | | |||| || || || || || | |||| Sbjct 1128457 GCCAAAACAACAATGTGTTCAGAAGGAGTAAAACCGTC--TAATTCAACAAGCAACTGAT 1128514 Query 288968 TAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttt 289027 | | |||| ||| ||||| ||||| || |||| || || | | ||| | || Sbjct 1128515 TCAATGTTGTTTCTCTTTCTTCATTGGAGTTGCTTGCATTTCC--ACTTCCTC-TGGCTT 1128571 Query 289028 tACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087 |||||| ||||||||||| ||||| ||||| | |||||||| || ||| ||| || Sbjct 1128572 TACCAATGGCATCAATTTCATCAATAAAAATAATACACGGAGCGTTCATTCTGGCATTTT 1128631 Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147 ||| || || || || | || || |||| ||||||| ||||||| ||||| |||||| Sbjct 1128632 TAAACAAGTCCCTGACTCTTGAGGCACCAACACCAACAAACATTTCAACAAACTCAGAAC 1128691 Query 289148 CGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 |||| || || |||| ||| ||||| ||||| || | |||| | |||| Sbjct 1128692 CGGAAACAGAAAAAAATGGAACACCCGCTTCACCTGCCGTGGCTTTAGCCAACAAAGTCT 1128751 Query 289208 TACCTGTTCCAGGTGGTCC-CTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266 |||| || || || || || ||| || | | | || |||| | ||| || ||| | Sbjct 1128752 TACCGGTACCTGGAGGACCACTC-AAAATAGCACCTCTTGGGATTTTCGCACCAAGTTTC 1128810 Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326 | || |||| ||| || ||||| | |||| |||| | ||| | |||||| ||| Sbjct 1128811 TCGTACTTCTTTGGGTGTTTCAAAAAATTGACAAATTCCATGATTTCTTCTTTTGCTTCA 1128870 Query 289327 TCACATCCTGCTACATCAGCAAA 289349 || || ||||| ||||| |||| Sbjct 1128871 TCGCAACCTGCAACATCGTCAAA 1128893 Score = 114 bits (126), Expect = 4e-20 Identities = 392/598 (66%), Gaps = 25/598 (4%) Strand=Plus/Minus Query 133073 AGGTTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAA-CAGCA 133131 || |||||| |||| ||||| || | | || |||||||| |||||| ||| | Sbjct 313330 AGATTTGTTTTGTTTCCAATCAAATATCATGAAATTTGGCAAGCTTATAAACGTGCAG-A 313272 Query 133132 AGATTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGC 133191 || || ||||||||| || ||| | ||| |||||||||| || | | |||| Sbjct 313271 AGCTTCTTTTTGGACTGCAGAAGAAATTGATCTATCCAAAGATTT-GCACGATTGGAATA 313213 Query 133192 CC----TTACTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGA 133247 | | | || |||||| | ||| ||| || ||||||| |||||||| || Sbjct 313212 ACAGAATGAATGAAAATGAAAGATTTTTCATTAGTAGAGTTTTAGCATTTTTTGCAGCTT 313153 Query 133248 GTGATGGTATTGTTCTTGAAAATTTAG--GAACACGGTTTATGGGAGAAGTTCAACTGGC 133305 |||||| |||||| ||||||||| | ||| | |||| | |||||| ||| | | Sbjct 313152 CTGATGGAATTGTTAATGAAAATTTGGTTGAAAAT--TTTAGTGCAGAAGTGCAAATTCC 313095 Query 133306 CGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATA 133365 |||||| ||||| || | || ||| ||||||||| || || | || || Sbjct 313094 TGAAGCCAAATGTTTTTACGGATTTCAAATTATGATGGAAAACATTCACAGTGAAACTTA 313035 Query 133366 TTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCA--CAA---ACTATTC 133420 ||| | | ||||||||||| |||||||| |||| ||| | | | ||||| Sbjct 313034 TTCACTTTTGATTGATACTTATATCAAAGA-----TCCAAAAGAAAGCGATTTTTTATTC 312980 Query 133421 AACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATC 133480 || |||||| | ||||| || ||| | || | || |||||||||| |||||| Sbjct 312979 AATGCCATTGAAACAATTCCTCAAATCAAAGAAAAGGCAGAATGGGCTATTAGATGGATT 312920 Query 133481 CAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtt 133540 || ||| | ||| ||||||| | | || || ||||||| || || || || Sbjct 312919 CAAGACGAAGATGCACTTTTTGCTGAAAGATTGGTGGCATTTGCTGCTGTGGAAGGTGTT 312860 Query 133541 tttttCAGTGGTGCGTTCTGCT-CTATTTTTTGGCTTAA-AAAGCGTGGTATTCTACCTG 133598 || || ||| | || |||| | || |||||| | || ||| | ||| | | || | Sbjct 312859 TTCTTTTCTGGATCCTT-TGCTGCAATCTTTTGGTTGAAGAAAAAGGGGT-TGATGCCAG 312802 Query 133599 GACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 | | |||||| || ||| | |||| || || || | ||| || ||||| ||||| Sbjct 312801 GTTTAACTTTTTCAAATGAATTGATTTGTAGAGATGAAGGACTGCATACCGATTTTGC 312744 >seq2 Length=821690 Score = 111 bits (122), Expect = 5e-19 Identities = 335/509 (66%), Gaps = 18/509 (4%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| || || | | | || ||| ||||| ||||| ||||||||||| | Sbjct 389681 CTATCAAATCTCCCTGGTCTCATCAAAGCTTTATCTAAAATATCTGCTCTGTTTGTCCCG 389740 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTA-AATCCATCCATACTTGTTAAAATTTGATT 288968 ||||| |||| || |||| |||| || || || ||||| || | ||||| Sbjct 389741 GCCAAAACAATGATTTGTTCG-TTTGTTTCGAAACCGTCCATTTCCACTAGCAACTGATT 389799 Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATC------ACCC----GAATCGC 289018 | || ||| ||||| ||||||| ||||| ||| | ||| | || | Sbjct 389800 CAAAGTACTTTCTCTTTCRTCATTTGCACCTCCAGAACCCATGCCACCGCCTTGTTTCCC 389859 Query 289019 TCCttt--ttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTG 289076 ||| | || | || | |||||| ||||| ||||| ||||| | || |||| ||| Sbjct 389860 ACCTCTGCTTCTCCCGATAGCATCGATTTCATCAATAAAAATAATGCAGGGAGTCATTTC 389919 Query 289077 TCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTAC 289136 ||| || | ||||| || || | || | || || |||| ||||||| |||||||||| Sbjct 389920 TCTAGCTTTAGCAAACAAGTCCCGCACTCTAGACGCACCAACACCAACAAACATTTCTAC 389979 Query 289137 AAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGC 289196 ||| ||||| | || || | || | ||| |||||| ||||| || | || Sbjct 389980 AAACTCAGACCCAGAAACAGACAAAAAGGGAACACCTGCTTCTCCTGCAGTCGCTTTKGC 390039 Query 289197 CAGAAGTGTCTTACCTGTTCCAGGTGGTCC-CTCTA-ATAGAACTCCCTTTGGTACTTTT 289254 || | || || ||||| || ||||| || ||| | || | || | ||| || || | Sbjct 390040 CAACAAGGTTTTCCCTGTACCTGGTGGGCCACTCAAGATGGCAC-CTCTTGGGATCTGTG 390098 Query 289255 GCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCA 289314 |||| | | |||| || ||| | || ||||| || |||| |||| | ||| Sbjct 390099 CACCCAATTTGGTGA-ATTTTTCTGGGGTTTTCAAAAACTCAACAAATTCCATGATTTCT 390157 Query 289315 TATTTTGCCTCATCACATCCTGCTACATC 289343 | |||||| |||||||| ||||| || || Sbjct 390158 TGTTTTGCTTCATCACACCCTGCCACGTC 390186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817279419729