Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2 150 2e-31
seq17 149 6e-31
seq15 127 2e-24
seq16 84.2 2e-11
seq14 84.2 2e-11
>seq2
Length=821690
Score = 150 bits (166), Expect = 2e-31
Identities = 174/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 24713 TTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTA 24772
||| | ||||| |||| ||||| ||||| || || ||||| ||| | ||||||| |
Sbjct 193648 TTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCATC 193707
Query 24773 GA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTT 24831
|| |||| ||| | ||| ||||||||||||||||| || || || || |||||| | ||
Sbjct 193708 GATAACGTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 193766
Query 24832 GATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAA 24891
||||||||| || ||||| |||| ||| |||| |||| || || |||||||||||
Sbjct 193767 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 193826
Query 24892 GGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943
||||| || || || ||||| ||| ||||| | || || | | ||| |||
Sbjct 193827 AGAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGGTGTTATTGAACCA 193878
>seq17
Length=834807
Score = 149 bits (164), Expect = 6e-31
Identities = 175/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 24697 TGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGA 24756
||| | |||||| || || ||||||| | || |||||||| ||||| | ||||| ||
Sbjct 25514 TGACAAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGA 25573
Query 24757 AGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCC 24816
| | | ||||| | || | || ||| || ||||||||||||||||| || || ||
Sbjct 25574 ATCTTCTGACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACC 25633
Query 24817 CGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGA 24876
|| |||||| | ||||||||||| || ||||| |||| ||| |||| |||| ||
Sbjct 25634 TGACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGA 25693
Query 24877 TTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
|| ||||||||||| ||||| || || || ||||| ||| ||||| | || || ||
Sbjct 25694 CTACAACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGGTGG 25750
>seq15
Length=1932387
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| || || ||||||| | || || ||||| || || | ||||| || || |
Sbjct 1576874 GATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTC 1576933
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || | || || |||||||||||||||||||| || || || || ||
Sbjct 1576934 GGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCA 1576993
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||||||||| || |||||| |||| || |||| |||| || || ||
Sbjct 1576994 ACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAA 1577053
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| |||||||| || || || || || || ||| ||||| | || ||
Sbjct 1577054 CATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGG 1577101
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || ||||||| | || || || || || || | ||||| ||| | |
Sbjct 1576647 ATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATCTTCA 1576706
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||||||||| || || || || || |||
Sbjct 1576707 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGACCAA 1576766
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | ||||||||||| || |||||| |||| || |||| |||| || || |||
Sbjct 1576767 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1576826
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| |||||||| || || || || || || ||| ||||| | || ||
Sbjct 1576827 ATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGG 1576873
>seq16
Length=1651669
Score = 84.2 bits (92), Expect = 2e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182
||||| |||||||| ||||||||| | ||||| || || || |||| ||| |||
Sbjct 930354 TATTCCACAATTTCACAACACAAATTGGATGATTTGATGGTTCCCAAGTTTTTTTGGTTG 930295
Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTC 139242
|||| |||||||||||||||||||| ||| | ||||| || ||||| |||||
Sbjct 930294 GATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTTCTGTTTGTGCT 930235
Query 139243 TCTATAATG 139251
|| | ||||
Sbjct 930234 TCCAAAATG 930226
>seq14
Length=1659880
Score = 84.2 bits (92), Expect = 2e-11
Identities = 116/161 (72%), Gaps = 1/161 (1%)
Strand=Plus/Minus
Query 126029 TGGTCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAtttttt 126088
|||| || || ||| |||||||| || || || || || ||||| || || ||||
Sbjct 312888 TGGTGGCATTTGCTGCTGTGGAAGGTGTTTTCTTTTCTGGATCCTTTGCTGCAATCTTTT 312829
Query 126089 ttATAAAGACAAAGGGTATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTG 126148
| |||| |||||| | ||||| ||| |||| || || || ||||||| | | |
Sbjct 312828 GGTTGAAGAAAAAGGGGTTGATGCCAGGTTTAACTTTTTCAAATGAATTGATTTGTAGAG 312769
Query 126149 ACGAAGGACTCCATACGGACTTTGCATGTCT-GTATTACAA 126188
| |||||||| ||||| || ||||||||||| |||| |||
Sbjct 312768 ATGAAGGACTGCATACCGATTTTGCATGTCTATTATTCCAA 312728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897504396760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |