Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 150 2e-31 seq17 149 6e-31 seq15 127 2e-24 seq16 84.2 2e-11 seq14 84.2 2e-11 >seq2 Length=821690 Score = 150 bits (166), Expect = 2e-31 Identities = 174/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 24713 TTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTA 24772 ||| | ||||| |||| ||||| ||||| || || ||||| ||| | ||||||| | Sbjct 193648 TTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCATC 193707 Query 24773 GA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTT 24831 || |||| ||| | ||| ||||||||||||||||| || || || || |||||| | || Sbjct 193708 GATAACGTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 193766 Query 24832 GATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAA 24891 ||||||||| || ||||| |||| ||| |||| |||| || || ||||||||||| Sbjct 193767 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 193826 Query 24892 GGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCCA 24943 ||||| || || || ||||| ||| ||||| | || || | | ||| ||| Sbjct 193827 AGAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGGTGTTATTGAACCA 193878 >seq17 Length=834807 Score = 149 bits (164), Expect = 6e-31 Identities = 175/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 24697 TGATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGA 24756 ||| | |||||| || || ||||||| | || |||||||| ||||| | ||||| || Sbjct 25514 TGACAAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGA 25573 Query 24757 AGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCC 24816 | | | ||||| | || | || ||| || ||||||||||||||||| || || || Sbjct 25574 ATCTTCTGACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACC 25633 Query 24817 CGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGA 24876 || |||||| | ||||||||||| || ||||| |||| ||| |||| |||| || Sbjct 25634 TGACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGA 25693 Query 24877 TTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || ||||||||||| ||||| || || || ||||| ||| ||||| | || || || Sbjct 25694 CTACAACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGGTGG 25750 >seq15 Length=1932387 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || ||||||| | || || ||||| || || | ||||| || || | Sbjct 1576874 GATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTC 1576933 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||||||||| || || || || || Sbjct 1576934 GGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCA 1576993 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||||||||| || |||||| |||| || |||| |||| || || || Sbjct 1576994 ACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAA 1577053 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| |||||||| || || || || || || ||| ||||| | || || Sbjct 1577054 CATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGG 1577101 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || ||||||| | || || || || || || | ||||| ||| | | Sbjct 1576647 ATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATCTTCA 1576706 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||||||||| || || || || || ||| Sbjct 1576707 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGACCAA 1576766 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||||||||| || |||||| |||| || |||| |||| || || ||| Sbjct 1576767 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1576826 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| || || || || || || ||| ||||| | || || Sbjct 1576827 ATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGG 1576873 >seq16 Length=1651669 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 139123 TATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTG 139182 ||||| |||||||| ||||||||| | ||||| || || || |||| ||| ||| Sbjct 930354 TATTCCACAATTTCACAACACAAATTGGATGATTTGATGGTTCCCAAGTTTTTTTGGTTG 930295 Query 139183 CTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTC 139242 |||| |||||||||||||||||||| ||| | ||||| || ||||| ||||| Sbjct 930294 GATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTTCTGTTTGTGCT 930235 Query 139243 TCTATAATG 139251 || | |||| Sbjct 930234 TCCAAAATG 930226 >seq14 Length=1659880 Score = 84.2 bits (92), Expect = 2e-11 Identities = 116/161 (72%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 126029 TGGTCGCTTTCGCTATAGTGGAAGGCGTGTTTTTCTCGGGTAGTTTTGCGGCTAtttttt 126088 |||| || || ||| |||||||| || || || || || ||||| || || |||| Sbjct 312888 TGGTGGCATTTGCTGCTGTGGAAGGTGTTTTCTTTTCTGGATCCTTTGCTGCAATCTTTT 312829 Query 126089 ttATAAAGACAAAGGGTATAATGCCCGGTCTAACGTTCAGCAACGAGTTGATTTCTCGTG 126148 | |||| |||||| | ||||| ||| |||| || || || ||||||| | | | Sbjct 312828 GGTTGAAGAAAAAGGGGTTGATGCCAGGTTTAACTTTTTCAAATGAATTGATTTGTAGAG 312769 Query 126149 ACGAAGGACTCCATACGGACTTTGCATGTCT-GTATTACAA 126188 | |||||||| ||||| || ||||||||||| |||| ||| Sbjct 312768 ATGAAGGACTGCATACCGATTTTGCATGTCTATTATTCCAA 312728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897504396760