Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq17 120 3e-22 seq2 100 2e-16 seq15 98.7 8e-16 >seq17 Length=834807 Score = 120 bits (132), Expect = 3e-22 Identities = 176/249 (71%), Gaps = 5/249 (2%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || |||||||| || || |||||||| || || |||||||||||| | ||| || || Sbjct 25518 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCT 25577 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || ||| | | | | || ||| || || ||||||||||| | || || Sbjct 25578 TCTGACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGAC 25637 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 ||||||||| | || | ||| |||||||| |||| |||| ||||| || | || ||| Sbjct 25638 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 25697 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG-----AAAAA 110504 ||||||||||||||||| || | || |||| || ||| || |||| || ||||| Sbjct 25698 AACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGGTGGTAAAAAA 25757 Query 110505 ATAAATAAG 110513 | ||| ||| Sbjct 25758 AGAAAGAAG 25766 >seq2 Length=821690 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 110282 TTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTC 110341 ||||||||||| ||||| || || || || ||| | ||| || || ||| || || Sbjct 193648 TTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCATC 193707 Query 110342 GGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTT 110401 | | || ||| || || ||||||||||| | || || ||||||||| | Sbjct 193708 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 193767 Query 110402 ATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAA 110461 || | ||| |||||||| |||| |||| ||||| || | || ||||||||||||||| Sbjct 193768 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 193827 Query 110462 GAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || | || |||| || ||| || |||| || Sbjct 193828 GAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGG 193865 >seq15 Length=1932387 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || ||||| || || || |||||||| || | ||| ||| | Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || ||||| ||||||||||| | || || ||| Sbjct 1576935 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAA 1576994 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | || | ||| ||||||||| |||| || | |||||| || |||| |||||| Sbjct 1576995 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1577054 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||| || || ||| | || | || || ||| || |||| || Sbjct 1577055 ATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGG 1577101 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 ||||||||||| || || ||||| || || || || ||||| || | ||| || || Sbjct 1576644 AAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATCT 1576703 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || || ||| | | || || ||||| |||||||| || | || || Sbjct 1576704 TCAGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGAC 1576763 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 ||||||||| | || | ||| ||||||||| |||| || | |||||| || |||| ||| Sbjct 1576764 CAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTAC 1576823 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| ||||| || || ||| | || | || || ||| || |||| || Sbjct 1576824 AACATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGG 1576873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841514464381