Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq17 179 7e-40 seq15 152 1e-31 seq2 152 1e-31 >seq17 Length=834807 Score = 179 bits (198), Expect = 7e-40 Identities = 183/238 (77%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 82573 TTTATCACCTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATAT 82632 ||| | ||| ||| |||||||| | || ||| || || || || |||||||| || || | Sbjct 25757 TTTTTTACC-ACCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGT 25699 Query 82633 TATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTT 82692 | || ||||| | | ||||||| ||||| | |||||| ||||||||||| | |||||||| Sbjct 25698 TGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTT 25639 Query 82693 GATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCAT 82752 | || || || || ||||| || ||||| || || ||||| ||||| ||||| || ||| Sbjct 25638 GGTCAGGTGGAATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTGTCAATAGTGTCAG 25579 Query 82753 TAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||| |||||||| || || || || |||||||| || || || || || ||||| Sbjct 25578 AAGATTCAACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 25521 >seq15 Length=1932387 Score = 152 bits (168), Expect = 1e-31 Identities = 179/242 (74%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || |||||||| | || ||||| || || || || || || || || || || || || Sbjct 1576873 CCACCTCTCAATCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGAC 1576814 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | |||| |||||||| | ||||| ||||||||||| | ||||||||| ||||| || Sbjct 1576813 AAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 1576754 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || || ||||| ||||| | || || || || ||||| || || ||| ||| Sbjct 1576753 ATCCCCTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCGACT 1576694 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATATTTTTC 82823 |||||||| || ||||| || ||||| || || || || || |||||| || | | ||| Sbjct 1576693 TCCAAAGTGATGGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCATTTTTTTTTGTTTT 1576634 Query 82824 TA 82825 || Sbjct 1576633 TA 1576632 Score = 145 bits (160), Expect = 1e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || |||||| || || || || || || || || || || || || Sbjct 1577102 ACCACCTCTCAATCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGA 1577043 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | |||| |||||||| | ||||| ||||||||||| | ||||||||| ||||| || Sbjct 1577042 CAAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 1576983 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || ||||| || ||||| ||||| | || || || || ||||| || | || || Sbjct 1576982 AATCCCTTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 1576923 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||| || || || || ||||| || || || || || ||||| Sbjct 1576922 TTCCAAAGTGATGGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875 >seq2 Length=821690 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | || ||| || || ||||| |||||||| || || || || ||||| Sbjct 193866 ACCACCTCTCAATCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGA 193807 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | ||||||| ||||| | |||||| ||||||||||| | ||||||||| || || || Sbjct 193806 CAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 193747 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || ||||| || ||||| || || ||||| || || || || || || || ||| || Sbjct 193746 AATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGAC 193687 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801 ||| | || || ||||| || || || || || ||||| Sbjct 193686 TTCTAGGGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 193648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981826986145763