Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq16 349 8e-91 seq14 197 3e-45 >seq16 Length=1651669 Score = 349 bits (386), Expect = 8e-91 Identities = 596/861 (69%), Gaps = 7/861 (1%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 ||||||||||| |||||| | ||| | |||||||| | | |||||||| | || | Sbjct 929483 TATTTTGGTTTTAAAACTTTAGAAAGATCTTATTTATTAAGAATCAATGGCCAAATTGCT 929542 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||| | || ||||| || || | | ||||| |||| |||||||| |||||||| | Sbjct 929543 GAAAGACCACAACATTTGATTATGAGAGTTGCTGTTGGAATTCATGGTAATGATATTGAR 929602 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAA-AAGAAAGCT-ATTCATGCTACTCCTA 110481 ||| | ||| |||| || | | || | |||| | | | ||||||| |||| | Sbjct 929603 AAAGTTTTGGAAACTTATAATTTGAT--GTCATTAAGATATTTCACTCATGCTTCTCCAA 929660 Query 110482 CCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTA 110541 | |||| || ||||| ||| || |||| || |||| || |||||| | | || | Sbjct 929661 CATTATTCAATGCAGGTACTCCAAGACCACAAATGTCTTCATGTTTTCTTGTTGCTATGA 929720 Query 110542 ACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAA 110601 | |||||||| ||||| || |||||||| || | |||||| |||| | |||||||||| Sbjct 929721 AAGATGATTCAATTGATGGAATTTATGACACTTTAAAAGAATGTGCTTTGATTTCTAAAA 929780 Query 110602 ACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAA 110661 |||| ||||||||| |||| ||||| ||||| | |||| ||| || |||| || Sbjct 929781 CTGCTGGTGGAATTGGTCTTCATATTCATAATATTAGATCAACAGGTTCATATATTGCTG 929840 Query 110662 CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAA 110721 | | || || |||| | |||| | |||||||| | ||||| ||||| | ||||||| Sbjct 929841 GAACAAACGGAACTTCTAATGGATTGATTCCAATGATTAGAGTTTTCAATAATACTGCAA 929900 Query 110722 AATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTT 110778 |||||| |||||||||| ||| ||| ||| | |||||| | ||| | ||||| | Sbjct 929901 GATATGTTGATCAAGGTGGTAATAAAAGACCTGGTGCTTTTGCTCTTTATTTAGAACCAT 929960 Query 110779 GGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA 110838 ||||| ||||| ||||| || | || |||| |||||||| || |||||| | Sbjct 929961 GGCATAGTGATATTTTTGATTTTATTGATATTCGGAAAAATCATGGTAAAGAAGAAATTA 930020 Query 110839 GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAG 110898 ||||| | ||||| ||| ||| ||||| || |||||||||| ||| || ||| ||| Sbjct 930021 GAGCAAGAGATTTGTTTCCTGCCTTGTGGGTTCCAGATTTATTTATGCAAAAAGTTAAAG 930080 Query 110899 AAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATG 110958 ||||| ||| | | | | ||| | |||||||| | |||||| |||| Sbjct 930081 AAAATTCAGATTGGACATTATTTTCTCCAAGTGAAGCTCCTGGTTTGAGTGATGTTTATG 930140 Query 110959 GAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAA 111018 | ||||| |||||| | | ||| | ||||||| ||||||| | | | ||| || Sbjct 930141 GTAAAGATTTTGAAAAATTATACAACAAATATGTTCAAGAAGGAAGAGGTAGAAAAACAA 930200 Query 111019 TTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTT 111078 || ||||||| || | |||| || | ||| ||||| ||||| || || || | Sbjct 930201 TTAAAGCTCAAAAATTATGGTATGCCATTTTGGAAGCACAAACAGAAACAGGTACACCAT 930260 Query 111079 ATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTA 111138 |||| | || |||||| | ||| ||||| || |||| || || ||||| || | Sbjct 930261 TTATTGTTTACAAAGATGCTTGTAACAAAAAATCCAACCAAAAAAACTTGGGAACCATCA 930320 Query 111139 AGTCTAGTAATTTGTGCTGTG 111159 | || |||||||| |||| Sbjct 930321 AATCATCCAATTTGTGTTGTG 930341 Score = 96.9 bits (106), Expect = 8e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365 |||||| | ||||||||| | || || ||||| || ||||| || |||| |||||| Sbjct 998108 AGACATATTGTTGACAATGACTTTGTGCTTTTCAACAGACAACCTTCTTTGCACAAAATG 998049 Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGT 305425 ||||||||| | || | ||| ||||| | | | |||||| |||| || | | Sbjct 998048 TCTATGATGTCCCACAGAGTTAAAGTCATGCCATATTCTACATTTAGATTGAACTTGTCT 997989 Query 305426 GCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAA 305485 | | | || || ||||| ||||||||||| |||||||||||| | || || |||||| Sbjct 997988 GTTACCTCTCCATACAATGCAGATTTTGATGGGGATGAAATGAATTTACACGTTCCTCAA 997929 Query 305486 TCAAAGGTTACAATGACTGAATTATCAGAAATATGTTCTGT 305526 ||| || | | |||||||| || |||| |||| Sbjct 997928 AGTGAGGAAACTAAAGCCGAATTATCCCAACTATGCGCTGT 997888 Score = 95.1 bits (104), Expect = 3e-14 Identities = 173/249 (69%), Gaps = 12/249 (5%) Strand=Plus/Plus Query 72169 ACTTTGCCAAACACAACGTGTTTGTTATTTAAATGTGGTTGAGGTGC-----AAGT-GTA 72222 ||||| ||||| |||||||||||||||||||| || | ||| || | || || Sbjct 1000638 ACTTTACCAAAAACAACGTGTTTGTTATTTAAGTGGGTCAAAGGCGCGTTGGATGTTGTT 1000697 Query 72223 ATGAAGAATTGCGAGTTATTTGAATCAGGACCCGAGTTAGCCATAG--AAACCAAACCTG 72280 |||||| ||||||| ||| | | || || | ||| |||||| ||| ||| | Sbjct 1000698 ATGAAGCATTGCGAACCATTGGTGTTTGGTCCAGCGTTGGCCATACTCAAAAGAAATGGG 1000757 Query 72281 CTTCTGAATGCTTTAATAA-GAAATTCTCATCTTCAAAAGTTTCTCCATATATACTTTGA 72339 || || || |||| || |||||| || |||||||| |||| ||||| ||||||| | Sbjct 1000758 CTAGTG--TG-TTTATGAATGAAATTTTCGTCTTCAAATTTTTCGCCATAAATACTTTCA 1000814 Query 72340 CCTGAGCTTCCATCAAAGTTCACAATATCACCTCCTTGAACCATAAAATTATTAATTACT 72399 || | |||||||| || | |||||| |||| ||| | || || || ||| Sbjct 1000815 CCCCCAGTCCCATCAAAATTTGTRAAATCACCAAACTGAAGCATGARATCTTTGATGACT 1000874 Query 72400 CTATGGAAA 72408 ||||||||| Sbjct 1000875 CTATGGAAA 1000883 Score = 87.8 bits (96), Expect = 4e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 305293 TGATATTGTTATCAGACAT-TTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCAT 305351 |||| ||||| ||||| ||||| ||| ||| ||| | || ||||| ||||| | Sbjct 551053 TGATGTTGTTGAAAGACACATTGAA-GACGGAGATATTGTTTTATTYAATAGACAACCTT 551111 Query 305352 CACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTC 305411 | | || | | ||||||| | ||||| | | ||||| | || | || ||| Sbjct 551112 CGTTACACAGATTGTCTATTTTATCTCATTATGCAAAAGTTAGACCTTGGAGAACTTTTA 551171 Query 305412 GATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATA 305471 || |||| | ||| |||||| || ||||| || ||||||||||| || ||||||||| Sbjct 551172 GACTAAACGAGTGTGTTTGTACACCATATAACGCAGATTTTGATGGTGACGAAATGAATT 551231 Query 305472 TGCATGTACCTCAA 305485 ||||||| |||||| Sbjct 551232 TGCATGTTCCTCAA 551245 >seq14 Length=1659880 Score = 197 bits (218), Expect = 3e-45 Identities = 467/702 (67%), Gaps = 15/702 (2%) Strand=Plus/Minus Query 131489 TTCTGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACC 131548 || ||||||| ||||| || ||| | |||||||| | | |||||| | || || Sbjct 313264 TTTTGGACTGCAGAAGAAATTGATCTATCCAAAGATTTGCACGATTGGAATAACAGAA-- 313207 Query 131549 TTGAATGAAAA----AGATTTTG--TTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGAT 131602 |||||||||| ||||||| || | |||| | ||||| || || | |||| Sbjct 313206 -TGAATGAAAATGAAAGATTTTTCATTAGTAGAGTTTTAGCATTTTTTGCAGCTTCTGAT 313148 Query 131603 GGCATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTA 131662 || ||||||| ||||||| | ||| ||||| | | |||| | | |||||||||| Sbjct 313147 GGAATTGTTAATGAAAATTTGGTTGAAAATTTTAGTGCAGAAGTGCAAATTCCTGAAGCC 313088 Query 131663 ACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTA 131722 | || || ||| ||||||| | ||| ||||| || || | |||||| | Sbjct 313087 AAATGTTTTTACGGATTTCAAATTATGATGGAAAACATTCACAGTGAAACTTATTCACTT 313028 Query 131723 TTGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTGATGCTGTAAAT 131782 |||||||| | | | | ||| || | | || | || ||||| |||| | | Sbjct 313027 TTGATTGATACTTATATCAAAGATCCAAAAGAAAGCGATTTTTTATTCAATGCCATTGAA 312968 Query 131783 AAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCC 131842 | | ||||| ||| ||| | || |||||||||||||||| |||||||||||| || Sbjct 312967 ACAATTCCTCAAATCAAAGAAAAGGCAGAATGGGCTATTAGATGGATTCAAGACGAAGAT 312908 Query 131843 GCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGT 131902 || |||| || |||| | || || |||||| ||| |||||| | |||||||| || Sbjct 312907 GCACTTTTTGCTGAAAGATTGGTGGCATTTGCTGCTGTGGAAGGTGTTTTCTTTTCTGGA 312848 Query 131903 GCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCC 131962 | || ||| ||||||||| | ||||| || |||||||| || | | || || Sbjct 312847 TCCTTTGCTGCAATCTTTTGGTTGAAGAAAAAGGGGTTGATGCCAGGTTTAACTTTTTCA 312788 Query 131963 AATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC---TATATTAATCTAT 132019 ||| |||| || | |||||||||| | ||||||| || ||||| | ||||| || | Sbjct 312787 AATGAATTGATTTGTAGAGATGAAGGACTGCATACCGATTTTGCATGTCTATTATTCCA- 312729 Query 132020 AGAAAATTTGCTGATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTT 132079 | | || | | |||| |||| ||| | | | || | | || | ||||||||| Sbjct 312728 --ACATTTGGAAAACAAACCTGATCCAAAAATTGCTGAAAGAATCATTACTGAAGCAGTT 312671 Query 132080 GATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAATGCT 132139 ||| || || | | || ||| || | ||| |||| | || ||||||||| Sbjct 312670 TCTATTGAAAAAAGATATTTTGAAGATGCACTACCTGTATCTTTGTTAGGAATGAATGCT 312611 Query 132140 GACTCTATGAAGGAGTACATTGAATTCGTTGCTGATCGTTTA 132181 | | ||||| | || | ||||| ||||||||| | ||| Sbjct 312610 GCTTTGATGAATCAATATGTGGAATTTGTTGCTGATAGATTA 312569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812541497337