Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq17 122 6e-23
seq2 122 6e-23
seq15 93.3 3e-14
>seq17
Length=834807
Score = 122 bits (134), Expect = 6e-23
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || |||||||| || ||| |||||||| |||||||| || |
Sbjct 25749 CACCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAG 25690
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | | || ||||||||||| || ||||| ||||| | || || || | |
Sbjct 25689 ACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 25630
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||||||||| ||||| | || |||| ||| | ||||| |||||
Sbjct 25629 GAATACCTTCTTTGTCTTGGATTTT-GGCTTTGACATTGTCAATAGTGTCAGAAGATTCA 25571
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | || || ||||||||||| || ||||| || || || |||||
Sbjct 25570 ACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 25521
>seq2
Length=821690
Score = 122 bits (134), Expect = 6e-23
Identities = 159/220 (72%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || |||||||| |||||| |||||||| |||||||| || |
Sbjct 193867 CACCACCTCTCAATCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAG 193808
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | | || ||||||||||| || ||||| ||||| | || || || | |
Sbjct 193807 ACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 193748
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCA 33700
| | |||||||||||| ||||| ||| | || | ||||||| ||||| |
Sbjct 193747 GAATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGA 193688
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740
| || | ||||| || ||||| ||||| ||||| |||||
Sbjct 193687 CTTCTAGGGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 193648
>seq15
Length=1932387
Score = 93.3 bits (102), Expect = 3e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || || ||||| || ||| ||| ||||| |||||||| || |
Sbjct 1577103 CACCACCTCTCAATCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCG 1577044
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | |||| ||||| ||||| || ||||| ||||| | || || ||| | |
Sbjct 1577043 ACAAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 1576984
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | ||||||||||| || || | | || | ||| | ||||| || ||
Sbjct 1576983 GAATCCCTTCTTTGTCTTGGATCTT-GGACTTGACGTTGTCGATCGTGTCCGAGGACTCG 1576925
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | ||||| ||||| || || || ||||| || || || |||||
Sbjct 1576924 ACTTCCAAAGTGATGGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||||||||| | || || ||||| || ||| ||| ||||| |||||||| || ||
Sbjct 1576873 CCACCTCTCAATCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGAC 1576814
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| || | |||| ||||| ||||| || ||||| ||||| | || || ||| | ||
Sbjct 1576813 AAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 1576754
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || |||||||| || || | | || | ||| | ||||| ||||| ||
Sbjct 1576753 ATCCCCTCTTTGTCTTGGATCTT-GGACTTGACGTTGTCGATCGTGTCTGAAGATTCGAC 1576695
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||| || || || || || ||||| || || || |||||
Sbjct 1576694 TTCCAAAGTGATGGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703931896640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |