Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq17 122 6e-23 seq2 122 6e-23 seq15 93.3 3e-14 >seq17 Length=834807 Score = 122 bits (134), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | || |||||||| || ||| |||||||| |||||||| || | Sbjct 25749 CACCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAG 25690 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || ||||||||||| || ||||| ||||| | || || || | | Sbjct 25689 ACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 25630 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||||||||| ||||| | || |||| ||| | ||||| ||||| Sbjct 25629 GAATACCTTCTTTGTCTTGGATTTT-GGCTTTGACATTGTCAATAGTGTCAGAAGATTCA 25571 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || ||||||||||| || ||||| || || || ||||| Sbjct 25570 ACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 25521 >seq2 Length=821690 Score = 122 bits (134), Expect = 6e-23 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | || |||||||| |||||| |||||||| |||||||| || | Sbjct 193867 CACCACCTCTCAATCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAG 193808 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || ||||||||||| || ||||| ||||| | || || || | | Sbjct 193807 ACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 193748 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCA 33700 | | |||||||||||| ||||| ||| | || | ||||||| ||||| | Sbjct 193747 GAATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGA 193688 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740 | || | ||||| || ||||| ||||| ||||| ||||| Sbjct 193687 CTTCTAGGGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 193648 >seq15 Length=1932387 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | || || ||||| || ||| ||| ||||| |||||||| || | Sbjct 1577103 CACCACCTCTCAATCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCG 1577044 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | |||| ||||| ||||| || ||||| ||||| | || || ||| | | Sbjct 1577043 ACAAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTG 1576984 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||||||||| || || | | || | ||| | ||||| || || Sbjct 1576983 GAATCCCTTCTTTGTCTTGGATCTT-GGACTTGACGTTGTCGATCGTGTCCGAGGACTCG 1576925 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| ||||| || || || ||||| || || || ||||| Sbjct 1576924 ACTTCCAAAGTGATGGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||||||| | || || ||||| || ||| ||| ||||| |||||||| || || Sbjct 1576873 CCACCTCTCAATCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGAC 1576814 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || | |||| ||||| ||||| || ||||| ||||| | || || ||| | || Sbjct 1576813 AAAGTTCTGCCGTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGA 1576754 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || |||||||| || || | | || | ||| | ||||| ||||| || Sbjct 1576753 ATCCCCTCTTTGTCTTGGATCTT-GGACTTGACGTTGTCGATCGTGTCTGAAGATTCGAC 1576695 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || || ||||| || || || ||||| Sbjct 1576694 TTCCAAAGTGATGGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703931896640