Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq17 129 1e-24
seq15 129 1e-24
seq2 123 6e-23
>seq17
Length=834807
Score = 129 bits (142), Expect = 1e-24
Identities = 151/202 (75%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | ||||| ||||| || || |||||||| ||| ||||||||| | ||
Sbjct 25536 AAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCTTCTGACACTATTGACAAT 25595
Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||||| ||| || ||||| |||||||| ||| || ||| |||||| | |||||
Sbjct 25596 GTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTGATCTT 25654
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|| || || || ||||||||||| || |||||| | || |||||| | || ||||| ||
Sbjct 25655 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAAGAATC 25714
Query 206364 TACTCTTCACCTTGTTTTGAGA 206385
|| ||||| | |||||||||
Sbjct 25715 CACYCTTCATTTGGTTTTGAGA 25736
>seq15
Length=1932387
Score = 129 bits (142), Expect = 1e-24
Identities = 149/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || || ||||| |||||||||||||| || || ||||| ||||
Sbjct 1576890 AAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCGGACACGATCGACAAC 1576949
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| |||||||| ||| || ||| |||||| | |||||
Sbjct 1576950 GTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAACAAAGATTGATCTTT 1577009
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || || ||||||||||| || || |||||| | || |||||| |||| || |||||
Sbjct 1577010 GCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAACATCCAAAAGGAGTCC 1577069
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
|| ||||| | |||||||||
Sbjct 1577070 ACGCTTCATTTAGTTTTGAGA 1577090
Score = 123 bits (136), Expect = 6e-23
Identities = 148/201 (74%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| | || || || || |||||||||||||| ||| ||| ||||| ||||
Sbjct 1576662 AAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATCTTCAGACACGATCGACAAC 1576721
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| ||||| || ||| || ||| |||||| | |||||
Sbjct 1576722 GTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGACCAACAAAGATTGATCTTT 1576781
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || || ||||||||||| || || |||||| | || |||||| |||| || |||||
Sbjct 1576782 GCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAACATCCAAAAGGAGTCC 1576841
Query 206365 ACTCTTCACCTTGTTTTGAGA 206385
|| ||||| | || ||||||
Sbjct 1576842 ACGCTTCATTTAGTCTTGAGA 1576862
>seq2
Length=821690
Score = 123 bits (136), Expect = 6e-23
Identities = 155/209 (74%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| |||||| | || || || || ||||| | ||||| ||| ||| ||||| |
Sbjct 193647 TTTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCAT 193706
Query 206238 CGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296
||| || ||||| ||| || ||||| |||||||| ||| || ||| ||||||
Sbjct 193707 CGATAACGTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGAT 193765
Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356
| ||||| || || || || ||||||||||| || |||||| | || |||||| | || |
Sbjct 193766 TGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAA 193825
Query 206357 AAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|||| || |||||||| | |||||||||
Sbjct 193826 AAGAATCCACTCTTCATTTGGTTTTGAGA 193854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820542584657
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |