Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq17 129 1e-24 seq15 129 1e-24 seq2 123 6e-23 >seq17 Length=834807 Score = 129 bits (142), Expect = 1e-24 Identities = 151/202 (75%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | ||||| ||||| || || |||||||| ||| ||||||||| | || Sbjct 25536 AAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCTTCTGACACTATTGACAAT 25595 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| || ||||| |||||||| ||| || ||| |||||| | ||||| Sbjct 25596 GTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTGATCTT 25654 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || || ||||||||||| || |||||| | || |||||| | || ||||| || Sbjct 25655 TGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAAGAATC 25714 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 || ||||| | ||||||||| Sbjct 25715 CACYCTTCATTTGGTTTTGAGA 25736 >seq15 Length=1932387 Score = 129 bits (142), Expect = 1e-24 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| |||||||||||||| || || ||||| |||| Sbjct 1576890 AAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCGGACACGATCGACAAC 1576949 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| |||||||| ||| || ||| |||||| | ||||| Sbjct 1576950 GTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAACAAAGATTGATCTTT 1577009 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || ||||||||||| || || |||||| | || |||||| |||| || ||||| Sbjct 1577010 GCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAACATCCAAAAGGAGTCC 1577069 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || ||||| | ||||||||| Sbjct 1577070 ACGCTTCATTTAGTTTTGAGA 1577090 Score = 123 bits (136), Expect = 6e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || || || |||||||||||||| ||| ||| ||||| |||| Sbjct 1576662 AAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATCTTCAGACACGATCGACAAC 1576721 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| ||||| ||||| || ||| || ||| |||||| | ||||| Sbjct 1576722 GTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGACCAACAAAGATTGATCTTT 1576781 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || ||||||||||| || || |||||| | || |||||| |||| || ||||| Sbjct 1576782 GCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAACATCCAAAAGGAGTCC 1576841 Query 206365 ACTCTTCACCTTGTTTTGAGA 206385 || ||||| | || |||||| Sbjct 1576842 ACGCTTCATTTAGTCTTGAGA 1576862 >seq2 Length=821690 Score = 123 bits (136), Expect = 6e-23 Identities = 155/209 (74%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| |||||| | || || || || ||||| | ||||| ||| ||| ||||| | Sbjct 193647 TTTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCAT 193706 Query 206238 CGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC 206296 ||| || ||||| ||| || ||||| |||||||| ||| || ||| |||||| Sbjct 193707 CGATAACGTCAAAGCCAAA-ATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGAT 193765 Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356 | ||||| || || || || ||||||||||| || |||||| | || |||||| | || | Sbjct 193766 TGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAA 193825 Query 206357 AAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 |||| || |||||||| | ||||||||| Sbjct 193826 AAGAATCCACTCTTCATTTGGTTTTGAGA 193854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820542584657