Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq2 127 2e-24 seq17 123 2e-23 seq15 98.7 9e-16 >seq2 Length=821690 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243 ||||| ||||| ||||| || || | ||||| | ||||||||| | ||| || ||| Sbjct 193648 TTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCATC 193707 Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303 || | || ||| ||||| || ||||| ||||| || || || || |||||| | Sbjct 193708 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 193767 Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAA 25363 || | | || |||||| | ||||||| ||||| | | || ||||| ||||||||| Sbjct 193768 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 193827 Query 25364 GAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||| ||||||| || || ||||||||||| || Sbjct 193828 GAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGG 193865 >seq17 Length=834807 Score = 123 bits (136), Expect = 2e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 25170 ACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAG 25229 |||| |||||| | || || ||||| || || || ||| | || || | ||||| ||| Sbjct 25516 ACAAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAAT 25575 Query 25230 CCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289 | || ||||| || | || ||| ||||| || ||||| ||||| || || | Sbjct 25576 CTTCTGACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTG 25635 Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349 | || |||||| | || | | || |||||| | ||||||| ||||| | | || | Sbjct 25636 ACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACT 25695 Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||| ||||||||||||||||| ||||||| || || ||||||||||| || Sbjct 25696 ACAACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGG 25747 >seq15 Length=1932387 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 25168 AAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA 25227 ||| || |||||| | || || |||||||| || || || | ||||| | |||||||| Sbjct 1576640 AAAAAAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGA 1576699 Query 25228 AGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCC 25287 | | || || ||||| | || || || || || |||||||| || || || Sbjct 1576700 ATCTTCAGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACC 1576759 Query 25288 CGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGA 25347 || || |||||| | || | | || ||||| | ||||| | |||| | | || Sbjct 1576760 AGACCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGA 1576819 Query 25348 TTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| || ||||| || ||||| |||||||||| || ||||||||||| || Sbjct 1576820 CTACAACATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGG 1576873 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || |||||||| || || ||| | ||||| | |||||||| || Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || || || || ||||| || || || || || || Sbjct 1576935 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAA 1576994 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||| | || | | || ||||| | ||||| | |||| | | || ||||| Sbjct 1576995 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1577054 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || ||||| || ||||| |||||||||| || ||||||||||| || Sbjct 1577055 ATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGG 1577101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094305417440