Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq17 102 7e-17
seq2 86.0 6e-12
>seq17
Length=834807
Score = 102 bits (112), Expect = 7e-17
Identities = 170/241 (71%), Gaps = 6/241 (2%)
Strand=Plus/Minus
Query 35501 TCTTTATTT-CCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAAT 35556
||||| ||| ||||||| | || ||||| |||||||| | || || ||||||||
Sbjct 25760 TCTTTTTTTACCACCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAAT 25701
Query 35557 GTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTG 35616
|||||| || | ||| |||| | || |||| || ||||| ||||| ||||| | ||
Sbjct 25700 GTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTG 25641
Query 35617 CTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGT 35675
||||| | |||| | || ||||| ||| ||| || || | | | | | ||||
Sbjct 25640 TTGGTCAGGTGGAATACCTTCTTTGTCTTGGAT-TTTGGCTTTGACATTGTCAATAGTGT 25582
Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735
| ||||| || |||| || || |||||||| ||||||||||| || || || ||||
Sbjct 25581 CAGAAGATTCAACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCA 25522
Query 35736 T 35736
|
Sbjct 25521 T 25521
>seq2
Length=821690
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| | || ||||| |||||||| | || || |||||||||||||| || | |
Sbjct 193865 CCACCTCTCAATCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 193806
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
|| |||| | || |||| || ||||| ||||| ||||| | || ||||| | |||
Sbjct 193805 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 193746
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT-GCCACCGTGTCGCTCGATTCCAC 35688
| | || ||||| ||| ||| |||| ||| | | |||||| ||||| ||
Sbjct 193745 ATACCTTCTTTGTCTTGGAT-TTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGAC 193687
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727
|| | ||||| || ||||| || || ||||| |||||
Sbjct 193686 TTCTAGGGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 193648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793504206360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |