Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq17 102 7e-17 seq2 86.0 6e-12 >seq17 Length=834807 Score = 102 bits (112), Expect = 7e-17 Identities = 170/241 (71%), Gaps = 6/241 (2%) Strand=Plus/Minus Query 35501 TCTTTATTT-CCACCACGT---AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAAT 35556 ||||| ||| ||||||| | || ||||| |||||||| | || || |||||||| Sbjct 25760 TCTTTTTTTACCACCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAAT 25701 Query 35557 GTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTG 35616 |||||| || | ||| |||| | || |||| || ||||| ||||| ||||| | || Sbjct 25700 GTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTG 25641 Query 35617 CTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGT 35675 ||||| | |||| | || ||||| ||| ||| || || | | | | | |||| Sbjct 25640 TTGGTCAGGTGGAATACCTTCTTTGTCTTGGAT-TTTGGCTTTGACATTGTCAATAGTGT 25582 Query 35676 CGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 | ||||| || |||| || || |||||||| ||||||||||| || || || |||| Sbjct 25581 CAGAAGATTCAACTTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCA 25522 Query 35736 T 35736 | Sbjct 25521 T 25521 >seq2 Length=821690 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| | || ||||| |||||||| | || || |||||||||||||| || | | Sbjct 193865 CCACCTCTCAATCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 193806 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || |||| | || |||| || ||||| ||||| ||||| | || ||||| | ||| Sbjct 193805 AAAGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 193746 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT-GCCACCGTGTCGCTCGATTCCAC 35688 | | || ||||| ||| ||| |||| ||| | | |||||| ||||| || Sbjct 193745 ATACCTTCTTTGTCTTGGAT-TTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGAC 193687 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAA 35727 || | ||||| || ||||| || || ||||| ||||| Sbjct 193686 TTCTAGGGTGATAGTCTTACCAGTTAAGGTTTTGACAAA 193648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793504206360