Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq17 156 4e-33
seq15 147 2e-30
seq2 120 3e-22
seq16 93.3 4e-14
>seq17
Length=834807
Score = 156 bits (172), Expect = 4e-33
Identities = 176/233 (76%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | || || |||||||| ||||||||||||||||| | |
Sbjct 25747 CCACCTCTCAATCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGAC 25688
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||| || ||||| ||||| | || || || || ||
Sbjct 25687 AAAGTTCTACCA-TCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 25629
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||| ||||| |||||| ||| | ||||| || ||||| ||
Sbjct 25628 AATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAAC 25569
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718
|| | |||||||||||||| || ||||||||||||||||||||||| ||||
Sbjct 25568 TTCCAAGGTAATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTTGT 25516
>seq15
Length=1932387
Score = 147 bits (162), Expect = 2e-30
Identities = 179/240 (75%), Gaps = 3/240 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | || |||||||| |||||||| ||||||||||| | |
Sbjct 1576873 CCACCTCTCAATCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGAC 1576814
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || ||| || | |||||| || ||||| ||||| | || || || || ||
Sbjct 1576813 AAAGTTCTGCC-GTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 1576755
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || ||||| ||||| || || ||||| ||| | ||||| || ||||| ||
Sbjct 1576754 AATCCCCTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCGAC 1576695
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTTGTT 134725
|| | ||| ||||| || || || || ||||||||||||||||||||||| ||||||||
Sbjct 1576694 TTCCAAAGTGATGGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCATTTT-TTTTTGTT 1576636
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | || |||||||| |||||||| ||||||||||| | |
Sbjct 1577101 CCACCTCTCAATCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGAC 1577042
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || ||| || | |||||| || ||||| ||||| | || || || || ||
Sbjct 1577041 AAAGTTCTGCC-GTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGG 1576983
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||| || || ||||| ||| | ||||| || || || ||
Sbjct 1576982 AATCCCTTCTTTGTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 1576923
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| | ||| |||||||| || || || ||||||||||||||||||||
Sbjct 1576922 TTCCAAAGTGATGGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875
>seq2
Length=821690
Score = 120 bits (132), Expect = 3e-22
Identities = 160/220 (73%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | || || |||||||| ||||||||||||||||| | |
Sbjct 193865 CCACCTCTCAATCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 193806
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||| || ||||| ||||| | || || || || ||
Sbjct 193805 AAAGTTCT-ACCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 193747
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||| ||||| |||||| || | |||||||| ||||| ||
Sbjct 193746 AATACCTTCTTTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGAC 193687
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
|| || || || || ||||| ||||| ||||| || |||
Sbjct 193686 TTCTAGGGTGATAGTCTTACCAGTTAAGGTTTTGACAAAA 193647
>seq16
Length=1651669
Score = 93.3 bits (102), Expect = 4e-14
Identities = 162/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 9079 CCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATC 9138
|||||| | ||||||| |||| ||||||||||||||| || ||||| || | |||
Sbjct 931082 CCTCAAGAACTTAAAGACTTGTACAAAACCGTTTGGGAATTGTCGCAAAAAACCATCATC 931141
Query 9139 GGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTA 9198
| ||||||||| || ||| |||||||||||||| ||| ||||| ||| | | |
Sbjct 931142 GACATGGCTGCAGACAGATCAGCTTTTATTGATCAATCTCATTCTTTGAACATTCACATC 931201
Query 9199 GCCGCACCAACTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTA 9258
|| ||||| | | || || ||| |||| || ||| | |||||
Sbjct 931202 ATGGCCCCAACCATGGGTAAATTGACCTCCATGCATTTTTACGGGTGGTCTAAAGGTTTG 931261
Query 9259 AAAACAGGCATGTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAAATTTAC 9314
|||||||| |||||||| ||| | || || |||| ||| | ||| |||||||
Sbjct 931262 AAAACAGGTATGTACTACTTGAGAACCCAAGCCGCTTCTGCTGCCATCCAATTTAC 931317
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398292602840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |