Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq14 338 5e-88
seq15 194 1e-44
seq16 87.8 1e-12
>seq14
Length=1659880
Score = 338 bits (374), Expect = 5e-88
Identities = 623/892 (70%), Gaps = 31/892 (3%)
Strand=Plus/Minus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|| ||||| |||||||||| |||||||||| || |||||| || ||| ||| |
Sbjct 313330 AGATTTGTTTTGTTTCCAATCAAATATCATGAAATTTGGCAAGCTTATAAACGTGCAGAA 313271
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGC 43815
|| || |||||||| ||||||||| ||||| | | ||||| || |||| |||||| |
Sbjct 313270 GCTTCTTTTTGGACTGCAGAAGAAATTGATCTATCCAAAGATTT-GCACGATTGGAATAA 313212
Query 43816 ATTAA--AACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872
|| || | || |||| | ||| || | ||||| || |||||||| ||
Sbjct 313211 CAGAATGAATGAAAATGAAAGATTTTTCATTAGTAGAGTTTTAGCATTTTTTGCAGCTTC 313152
Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTT-GCGCAAGAAGTTCAATTACCAG 43931
|| || || || ||||||||||||||| ||| | ||| ||||| ||| | || |
Sbjct 313151 TGATGGAATTGTTAATGAAAATTTGGTTGAAAATTTTAGTGCA-GAAGTGCAAATTCCTG 313093
Query 43932 AAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACA 43991
|||| ||||||||| || ||||||||| || ||||| ||||| |||| ||
Sbjct 313092 AAGCCAAATGTTTTTACGGATTTCAAATTATGATGGAAAACATTCACAGTGAAACTTATT 313033
Query 43992 GTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTA----AT 44047
||| |||| ||||| || ||||||||| || |||| | ||||| |||| ||
Sbjct 313032 CACTTTTGATTGATACTTATATCAAAGATC--CAAAAGAA--AGCGATTTTTTATTCAAT 312977
Query 44048 GCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATA-AA 44106
|| || |||||| | ||| || ||| | || ||||| ||||| ||| |||||| ||
Sbjct 312976 GCCATTGAAACAATTCCTCAAATCAAAGAAAAGGCAGAATGGGCTATTAGATGGATTCAA 312917
Query 44107 TTCAAATGATTC---TTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTT 44163
| || ||| | ||||| ||| || | || || ||||| | ||||||||| ||||
Sbjct 312916 GACGAA-GATGCACTTTTTGCTGAAAGATTGGTGGCATTTGCTGCTGTGGAAGGTGTTTT 312858
Query 44164 CTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTT 44223
|||||| ||||| ||||| || || |||||||| |||||| || |||||||| || ||
Sbjct 312857 CTTTTCTGGATCCTTTGCTGCAATCTTTTGGTTGAAGAAAAAGGGGTTGATGCCAGGTTT 312798
Query 44224 GACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283
|| ||||||||||| || || || | |||||||| | ||| ||||||||| || |
Sbjct 312797 AACTTTTTCAAATGAATTGATTTGTAGAGATGAAGGACTGCATACCGATTTTGCATGTCT 312738
Query 44284 GTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGA---TATTGT 44340
||| | | || | ||| | | || || | || | | |||| | || || |
Sbjct 312737 ATTATTCCAACAT-TTGGAAA--ACAAACC-TGATCCA--AAAATTGCTGAAAGAATCAT 312684
Query 44341 TGTAGAGGCAGTAAAGATAG-AACAAGAATTTATGACAACAGCATTACCTGTAAATTTAA 44399
| || ||||| || | || |||| || ||| | ||| |||||||| |||
Sbjct 312683 TACTGAAGCAGTTTCTATTGAAAAAAGATATTTTGA-AGATGCACTACCTGTATCTTTGT 312625
Query 44400 TAGGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTT 44459
|||||||||||| ||||||||| |||||| | |||| |||| ||| | ||| |
Sbjct 312624 TAGGAATGAATGCTGCTTTGATGAATCAATATGTGGAATTTGTTGCTGATAGATTATTGG 312565
Query 44460 TGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATA 44519
| | | ||||| ||| ||| | || | ||| ||||| ||||||||||||||||| |
Sbjct 312564 TTGCATTGGGTAACGAAAAATATTACAATGTTTCCAACCCATTTGATTTTATGGAAAACA 312505
Query 44520 TTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571
| || |||| ||| |||||||| || ||||||||| | ||| || |||||
Sbjct 312504 TCTCTTTGGCAGGAAAAACAAATTTCTTTGAAAAAAGAGTTTCTGATTATCA 312453
>seq15
Length=1932387
Score = 194 bits (214), Expect = 1e-44
Identities = 382/559 (68%), Gaps = 16/559 (3%)
Strand=Plus/Minus
Query 19232 AAGACATGCAAATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTG 19291
|||||||| |||| || ||| ||||| ||| || |||||||| | ||||||||||
Sbjct 1078659 AAGACATGGGTGTTGGTGGTTTGGACAAAGAATTTACTCAAATCTTTAGAAGAGCATTTG 1078600
Query 19292 TGTCGCGTGTTTTTTCTGCAGATGTCATTAAACAATTGGG-ATGTAAACATGTTCGTGGA 19350
||| | ||||| | ||||||||||| ||||||| || | ||||| ||
Sbjct 1078599 CCTCGAGAATTTTTCCACCAGATGTCATTGCTAAATTGGGGATCTCG-CATGTCAAAGGT 1078541
Query 19351 CTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAA 19410
||| | | | ||| ||||| ||| || ||||| || ||||| ||| || || |||
Sbjct 1078540 CTTCTTTTGTTTGGTCCACCTGGTACAGGTAAAACTTTGATTGCTAGAAAAATTGGTACC 1078481
Query 19411 TTACTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATAT 19467
| |||| | || ||||| |||||||| |||||||||||||| || | |||||
Sbjct 1078480 ATGCTTAATGCGAAGGAACCT---AAAATTGTCAATGGTCCTGAAATTTTGAGCAAATAC 1078424
Query 19468 GTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAA 19527
|| || || ||||||||| | || ||||||| ||||| |||| |||| | |||
Sbjct 1078423 GTTGGGTCTTCTGAAGAAAATATTAGAAATTTGTTTAAAGACGCAGAAGCAGAATACAAA 1078364
Query 19528 CGTTTAGGGCGCA-AAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTG 19586
| | || | | |||||||| | |||||||| || | ||||||||||| | | |
Sbjct 1078363 -GCAAAAGGAGAAGAAAGTTCTCTACACATTATCATTTTTGATGAATTGGATTCTGTTTT 1078305
Query 19587 TAAGCAAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACT 19640
||||| || || || || || | || || ||||| ||| || |||||| |
Sbjct 1078304 CAAGCAGAGGGGGTCTAGAGGTGATGGGACCGGGGTTGGTGACAATGTCGTGAATCAATT 1078245
Query 19641 CCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAA 19700
|| | ||| | || |||||| | || |||| || ||||| |||||||| ||||| ||
Sbjct 1078244 GTTGGCTAAAATGGATGGTGTTGATCAGTTGAACAACATTTTGGTTATTGGTATGACCAA 1078185
Query 19701 TAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGA 19760
| | || || || || | |||||| || |||| ||| | || || | | | ||
Sbjct 1078184 TCGTAAAGATTTGATTGATAACGCCTTGTTGAGACCAGGTAGATTTGAGGTTCAAGTGGA 1078125
Query 19761 AATTAACTTACCCGATGAA 19779
||| || || || ||||||
Sbjct 1078124 AATCAAATTGCCAGATGAA 1078106
>seq16
Length=1651669
Score = 87.8 bits (96), Expect = 1e-12
Identities = 290/451 (64%), Gaps = 35/451 (8%)
Strand=Plus/Plus
Query 40863 GAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGAC 40922
|||||||||||||||||||||||||| ||||| | | |||||||||||||| |||| |
Sbjct 123938 GAAGGTGATCTTGGTCCTGTTTATGGGTTTCAATGGAGACATTTTGGAGCAGAATACAAA 123997
Query 40923 ACTATGTACTCTGATTATACCAATAAAGGAATGG------ATCAATTA-CAGTGCGTTAT 40975
|| |||| || | | | || | || || ||||| | | | | |||||
Sbjct 123998 AC-ATGT-----GACGACAACTATGATGGCCAGGGCTATGATCAACTGGCTGAG-GTTAT 124050
Query 40976 AGATACGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAAC 41035
| | | | ||| | | || | | || | || || ||| | || |||||||| |
Sbjct 124051 ATACAAACTGAAACACAACCCATACGACAGAAGAATTATCTTGAGTGCTTGGAACCCTCC 124110
Query 41036 GGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGC-- 41093
|| | | ||||| ||||| ||||| ||| | || |||| ||||| || ||
Sbjct 124111 AGATTTCAAAAAAATGGCTTTGCCTCCTTGCCATGTTTTCAGTCAATTTTATGTGAGCTT 124170
Query 41094 -------------AATGG------TGAACTGTCATGTCAATTGTATCAAAGATCAGGTGA 41134
|| | | |||| |||||| | || |||||||| ||||
Sbjct 124171 TCCTAAAGAAGAAAACGCCCGTCCTAAACTTTCATGTGTTCTATACCAAAGATCTTGTGA 124230
Query 41135 CATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGC 41194
||||| |||||||||| || ||||| || ||||| ||||| || | ||||||||
Sbjct 124231 TATGGGTTTAGGGGTCCCATTCAACATTGCATCCTATGCACTGCTAACTAAAATGATTGC 124290
Query 41195 ACACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTA 41254
| ||| || | | ||||||||||| ||||||| || || || | || ||||
Sbjct 124291 CAAAGTTTGTGATATGGATCCTGGTGAATTCATTCACACTTTGGGTGACGCCCACGTTTA 124350
Query 41255 CATTAATCACATAGAGCCGTTAACAGAACAA 41285
| ||||| | || | || | |||||||
Sbjct 124351 TAAAGATCACGTTGACGCTTTGAAAGAACAA 124381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455917652085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |