Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq16 185 1e-41 seq14 120 4e-22 >seq16 Length=1651669 Score = 185 bits (204), Expect = 1e-41 Identities = 489/739 (66%), Gaps = 22/739 (3%) Strand=Plus/Minus Query 110696 GTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATT 110755 |||||||| ||| ||||||| || ||||||| || |||||||| | |||||||||| Sbjct 930951 GTTCTTCTAGAGTACATGTTTGAAGTAAATGGTTCGAAACATTCATTGTAACCCAAGATT 930892 Query 110756 TGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTCT 110813 || | || || || |||||||| || |||| | || || ||| | | ||| | | Sbjct 930891 TGCGAAGTTGAAGCCGTTGGCATAGGAGCCAATAGCAATGA--GTTTCTTAAACCTGTTT 930834 Query 110814 CCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCT--TGGTTTCACCTTCCCA 110871 | |||| ||| | | | ||||| || | || || ||| | | | ||| Sbjct 930833 TCATGATTTTTTCTCTCAAAGATTCCCATTCCCAAA-GATCTGATGGAG-CTCTGTTCCA 930776 Query 110872 CATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACC 110931 ||| || || || | ||||||||||| || ||||| || | ||| | || || | ||| Sbjct 930775 CATATCGAATTGCAAAACCCCTTGGGAAGCTGGAGATCCTTGAAACGATTGGTATGGACC 930716 Query 110932 TTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGAT 110991 || | | |||| ||| | || |||| | ||||| |||| ||||| || || Sbjct 930715 TTCCTCCACGGCCATTTCGTTGGAAGCTTCCAAAGCAGCGTGGTACAATGTTTCGAAAAT 930656 Query 110992 ACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA-AATAAATA 111050 || || | | || ||||| || |||||||||| | | || || ||||| Sbjct 930655 TTGAATGTTTAGTTGTTTAGCTTCTTCAGAATCAAATG-GAACTCTCAAAAGCATAAAAG 930597 Query 111051 CATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCG 111110 || || | ||||||||| || ||| |||| ||||| |||| ||| || || |||| | Sbjct 930596 TGTCGGCCAAACCTTGAACCCCTAAAGCAATTGGTCTATGTCTCATGTTTGAGTTTCTTG 930537 Query 111111 CAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCT 111170 |||| || || ||||| | ||||| |||||||||| ||| | ||| | || | | | Sbjct 930536 CAGTTTCCACTGGATAGTAGTTTCTATCAATGACTCTGTTCAAGTTTCTTGTGATGACTT 930477 Query 111171 TTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAG------TCTCTT------CAT 111218 ||| || |||||| | ||||| ||| | |||| ||| | |||| | | Sbjct 930476 TTGCGACTTCATGCAATTTTTTGAAATTATAAGTTTGAGTTTGGTTRTCTTCTGAAACGT 930417 Query 111219 TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTG 111278 ||| | | ||| | || || || ||||| || ||||| || || || || ||||| | Sbjct 930416 TGATAAAAGCTGGTAAAGCAATGGAAGCCAAGTTACAAACTGCAGTTTCGTCATTATCAG 930357 Query 111279 TGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGT 111338 || || | |||||| ||| || ||||| || || || ||||| || ||||||| Sbjct 930356 AATATTCCACAATTTCACAACACAAATTGGATGATTTGATGGTTCCCAAGTTTTTTTGGT 930297 Query 111339 TACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTG 111398 | || ||||| || ||||| ||||| | || | || || || || || || |||| Sbjct 930296 TGGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACCTGTTTCTGTTTGTG 930237 Query 111399 ATTTGAGAATAGCCTTCCA 111417 || | ||| || | ||| Sbjct 930236 CTTCCAAAATGGCATACCA 930218 >seq14 Length=1659880 Score = 120 bits (132), Expect = 4e-22 Identities = 340/511 (67%), Gaps = 11/511 (2%) Strand=Plus/Plus Query 122671 TGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCC 122730 || || || ||||||| |||| | ||||||||| || || ||||||||| | ||| Sbjct 312756 TGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTTAAACCTGGCATCAACCCC 312815 Query 122731 CGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||||||| | || || ||| || || || || ||||| | ||| |||||| Sbjct 312816 TTTTTCTTCAACCAAAAGATTGCAGCA-AAGGATCCAGAAAAGAAAACACCTTCCACAGC 312874 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTG 122848 ||||| || | | | ||| || || || | ||| | | | || |||| | || | Sbjct 312875 AGCAAATGCCACCAATCTTTCAGC-AAAAAGTGCATCTTCGTCTTGAATCCATCTAATAG 312933 Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCT 122908 |||||| ||||| | | || || | |||| ||||| | ||||| | Sbjct 312934 CCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAATGGCATTGAATAAAAAATCGC 312993 Query 122909 TTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCA 122968 |||| | ||| || || || | |||||||| |||||| ||||| | |||| Sbjct 312994 TTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTGAATAAGTTTCACTGTGAATGT 313053 Query 122969 TTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCC 123027 ||| ||| || |||| || |||| || | ||||| || || || || | Sbjct 313054 TTTCCATCAT-AATTTGAAATCCGTAAAAACATTTGGCTTCAGGAATTTGCACTTCTGCA 313112 Query 123028 GCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGG 123087 |||||| | | | ||| ||| |||||||||||| || | ||||| ||||| | Sbjct 313113 CTAAAATTTTCAACCAAATTTTCATTAACAATTCCATCAGAAGCTGCAAAAAATGCTAAA 313172 Query 123088 A-TGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATC 123143 | | ||| | ||||| ||||||||||||||| | | ||||| |||| | ||| Sbjct 313173 ACTCTAC-TAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTGCAAATC 313231 Query 123144 TTTGGACAAATCAACTTCTTCCGCAGTCCAA 123174 |||||| | ||||| |||||| ||||||||| Sbjct 313232 TTTGGATAGATCAATTTCTTCTGCAGTCCAA 313262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031866543200