Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq17 102 9e-17
seq2 98.7 1e-15
seq15 93.3 5e-14
seq16 84.2 2e-11
>seq17
Length=834807
Score = 102 bits (112), Expect = 9e-17
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || || || | || || || || ||||| | || ||||| || |
Sbjct 25521 ATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCTTCT 25580
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | || || ||||| || ||||| || || ||||| || |||||
Sbjct 25581 GACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAA 25640
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||| ||| | || |||| | | || | | ||||| ||
Sbjct 25641 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 25700
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| ||||| |||||||| |||||| | || |||
Sbjct 25701 ATTCAAAAAGAATCCACYCTTCATTTGGTTTTG 25733
>seq2
Length=821690
Score = 98.7 bits (108), Expect = 1e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|||||||| || | || || |||||||| || || || || || || || | |||
Sbjct 193648 TTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCATC 193707
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | || || ||||| || ||||| || || ||||| || ||||| || | |
Sbjct 193708 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 193767
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||| ||| | || |||| | | || | | ||||| || | |||||
Sbjct 193768 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 193827
Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618
||||||||||||||| | || |||
Sbjct 193828 GAATCCACTCTTCATTTGGTTTTG 193851
>seq15
Length=1932387
Score = 93.3 bits (102), Expect = 5e-14
Identities = 149/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||| || || || || | || || ||||| || ||| | || || || ||
Sbjct 1576646 AATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATCTTC 1576705
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | || | || | ||| | || || || ||||| ||||| ||||| ||||||||
Sbjct 1576706 AGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGACCA 1576765
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | || ||||||||||| || | || || | | || | | ||||| ||
Sbjct 1576766 ACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAA 1576825
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||| ||||| |||||| ||||||||
Sbjct 1576826 CATCCAAAAGGAGTCCACGCTTCATTTAGTCTTG 1576859
Score = 82.4 bits (90), Expect = 9e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || || || | || || || || || ||| | || || |||||
Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || | ||| | || || || ||||| || || ||||| ||||||||
Sbjct 1576935 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAA 1576994
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || ||||||||||| || | || || | | || | | ||||| ||
Sbjct 1576995 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1577054
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
|||||||||| ||||| |||||| |||| |||
Sbjct 1577055 ATCCAAAAGGAGTCCACGCTTCATTTAGTTTTG 1577087
>seq16
Length=1651669
Score = 84.2 bits (92), Expect = 2e-11
Identities = 168/245 (69%), Gaps = 6/245 (2%)
Strand=Plus/Minus
Query 81498 AAGACCGATGCCACCTGACCACTTT--GAAATCTGAGCACACCGGTTCATGGTCTCATAA 81555
|||||| || ||||| | || ||| |||||| |||||| || | || ||||||
Sbjct 929800 AAGACCAATTCCACCAG--CAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTGTCATAA 929743
Query 81556 ATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAG-AAACAGCTTGACATCTGAGGGCT 81614
||||| || || ||| | |||||| ||| |||| ||||| ||||| || || ||
Sbjct 929742 ATTCCATCAATTGAATCATCTTTCATAGCAA-CAAGAAAACATGAAGACATTTGTGGTCT 929684
Query 81615 TTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAG 81674
| | || |||||||| | |||||| | || ||| ||||||| | ||||||||
Sbjct 929683 TGGAGTACCTGCATTGAATAATGTTGGAGAAGCATGAGTGAAATATCTTAATGACATCAA 929624
Query 81675 GTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCAT 81734
| ||| |||||| || |||||| | ||| ||||| || | ||| || | |||
Sbjct 929623 ATTATAAGTTTCCAAAACTTTYTCAATATCATTACCATGAATTCCAACAGCAACTCTCAT 929564
Query 81735 AAACA 81739
|| ||
Sbjct 929563 AATCA 929559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310278809040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |