Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq17 102 9e-17 seq2 98.7 1e-15 seq15 93.3 5e-14 seq16 84.2 2e-11 >seq17 Length=834807 Score = 102 bits (112), Expect = 9e-17 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | || || || || ||||| | || ||||| || | Sbjct 25521 ATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCTTCT 25580 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || || ||||| || ||||| || || ||||| || ||||| Sbjct 25581 GACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAA 25640 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||| ||| | || |||| | | || | | ||||| || Sbjct 25641 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 25700 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | ||||| |||||||| |||||| | || ||| Sbjct 25701 ATTCAAAAAGAATCCACYCTTCATTTGGTTTTG 25733 >seq2 Length=821690 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 |||||||| || | || || |||||||| || || || || || || || | ||| Sbjct 193648 TTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCATC 193707 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | || || ||||| || ||||| || || ||||| || ||||| || | | Sbjct 193708 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 193767 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||| ||| | || |||| | | || | | ||||| || | ||||| Sbjct 193768 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 193827 Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618 ||||||||||||||| | || ||| Sbjct 193828 GAATCCACTCTTCATTTGGTTTTG 193851 >seq15 Length=1932387 Score = 93.3 bits (102), Expect = 5e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || || || | || || ||||| || ||| | || || || || Sbjct 1576646 AATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATCTTC 1576705 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | || | || | ||| | || || || ||||| ||||| ||||| |||||||| Sbjct 1576706 AGACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGACCA 1576765 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | || ||||||||||| || | || || | | || | | ||||| || Sbjct 1576766 ACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAA 1576825 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| ||||| |||||| |||||||| Sbjct 1576826 CATCCAAAAGGAGTCCACGCTTCATTTAGTCTTG 1576859 Score = 82.4 bits (90), Expect = 9e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || || || | || || || || || ||| | || || ||||| Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | || || || ||||| || || ||||| |||||||| Sbjct 1576935 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAA 1576994 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||| || | || || | | || | | ||||| || Sbjct 1576995 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1577054 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| ||||| |||||| |||| ||| Sbjct 1577055 ATCCAAAAGGAGTCCACGCTTCATTTAGTTTTG 1577087 >seq16 Length=1651669 Score = 84.2 bits (92), Expect = 2e-11 Identities = 168/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 81498 AAGACCGATGCCACCTGACCACTTT--GAAATCTGAGCACACCGGTTCATGGTCTCATAA 81555 |||||| || ||||| | || ||| |||||| |||||| || | || |||||| Sbjct 929800 AAGACCAATTCCACCAG--CAGTTTTAGAAATCAAAGCACATTCTTTTAAAGTGTCATAA 929743 Query 81556 ATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAG-AAACAGCTTGACATCTGAGGGCT 81614 ||||| || || ||| | |||||| ||| |||| ||||| ||||| || || || Sbjct 929742 ATTCCATCAATTGAATCATCTTTCATAGCAA-CAAGAAAACATGAAGACATTTGTGGTCT 929684 Query 81615 TTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAG 81674 | | || |||||||| | |||||| | || ||| ||||||| | |||||||| Sbjct 929683 TGGAGTACCTGCATTGAATAATGTTGGAGAAGCATGAGTGAAATATCTTAATGACATCAA 929624 Query 81675 GTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCAT 81734 | ||| |||||| || |||||| | ||| ||||| || | ||| || | ||| Sbjct 929623 ATTATAAGTTTCCAAAACTTTYTCAATATCATTACCATGAATTCCAACAGCAACTCTCAT 929564 Query 81735 AAACA 81739 || || Sbjct 929563 AATCA 929559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310278809040