Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq17 145 7e-30 seq2 141 8e-29 seq15 122 8e-23 >seq17 Length=834807 Score = 145 bits (160), Expect = 7e-30 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || |||||| |||| || || | ||||| | ||||| ||| | || Sbjct 25521 ATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCTTCT 25580 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | |||||| ||||| |||||||||||||| || ||||| || ||| Sbjct 25581 GACACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAA 25640 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || |||||||||||||| || || | || || |||||| Sbjct 25641 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 25700 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||| || || || | |||||||||||| | ||| | ||||| Sbjct 25701 ATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGG 25747 >seq2 Length=821690 Score = 141 bits (156), Expect = 8e-29 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 ||||| ||||| | || || ||| |||| || || ||||| ||| | |||||| | || Sbjct 193648 TTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCATC 193707 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | |||||| ||||| |||||||||||||| || ||||| || ||||| | || Sbjct 193708 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 193767 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | || || |||||||||||||| || || | || || |||||||||||||| Sbjct 193768 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 193827 Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || | |||||||||||| | ||| | ||||| Sbjct 193828 GAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGG 193865 >seq15 Length=1932387 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| |||| || ||| | || ||| | ||||| ||| | || Sbjct 1576647 ATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATCTTCA 1576706 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || || ||||||||||| || || ||||| || ||| Sbjct 1576707 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAGACCAA 1576766 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || ||||| ||||||||| | || | || || |||||| Sbjct 1576767 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1576826 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | ||||| || ||| | ||| | ||||| || Sbjct 1576827 ATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGGGAT 1576876 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || ||||| |||| || || | || ||| | ||||| || | || Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || || |||||||||||||| || ||||| || ||| Sbjct 1576935 GACACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAA 1576994 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | || || | || || ||||| ||||||||| | || | || || |||||| Sbjct 1576995 CAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAAC 1577054 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||| || | ||||| |||||| | ||| | ||||| Sbjct 1577055 ATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGG 1577101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918307579840