Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq17 104 2e-17
seq15 93.3 3e-14
seq2 93.3 3e-14
>seq17
Length=834807
Score = 104 bits (114), Expect = 2e-17
Identities = 163/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|| ||||||||||| || |||||| | || || ||| ||||| | || || |||
Sbjct 25518 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCT 25577
Query 27847 ACCGACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
| ||| | | ||||| |||||| ||||| |||||||||||| |||| |
Sbjct 25578 TCTGACACTATTGACAAT--GTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTG 25635
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | || || ||||| || ||||||||||| || | | | ||||| || |
Sbjct 25636 ACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACT 25695
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||| |||||||| ||| | |||||||||||| | ||| | || ||
Sbjct 25696 ACAACATTCAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGAGGTGG 25747
>seq15
Length=1932387
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||||||||| || ||||| | ||||||||| || || | || ||||| | |
Sbjct 1576875 ATGCAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCG 1576934
Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| ||| |||| ||||| || || ||||||||||| |||| || |
Sbjct 1576935 GACACGATCGACAAC--GTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACC 1576992
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||| | || || ||||| || ||||| ||||| |||| | | ||||| || ||||
Sbjct 1576993 AACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACA 1577052
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| ||| ||| | ||||| |||||| | ||| | || ||
Sbjct 1577053 ACATCCAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGAGGTGG 1577101
Score = 84.2 bits (92), Expect = 2e-11
Identities = 159/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|||||||||||||| || ||||| | |||||||| || || | || ||||||
Sbjct 1576644 AAAATGCAAATTTTCGTTAAAACATTGACTGGGAAGACCATCACTTTGGAAGTCGAATCT 1576703
Query 27847 ACCGAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
| ||| ||| |||| ||||| || || |||||||| || |||| |
Sbjct 1576704 TCAGACACGATCGACAAC--GTCAAGTCCAAGATCCAAGACAAAGAGGGGATTCCACCAG 1576761
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | || || ||||| || ||||| ||||| |||| | | ||||| || |
Sbjct 1576762 ACCAACAAAGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACT 1576821
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||||||| ||| ||| | ||||| || ||| | ||| | || ||
Sbjct 1576822 ACAACATCCAAAAGGAGTCCACGCTTCATTTAGTCTTGAGATTGAGAGGTGG 1576873
>seq2
Length=821690
Score = 93.3 bits (102), Expect = 3e-14
Identities = 155/224 (69%), Gaps = 10/224 (4%)
Strand=Plus/Plus
Query 27798 TTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACCGACGATGT 27857
|||||| ||||| | ||||| || ||| || | || |||||| |||||
Sbjct 193647 TTTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGAC----- 193701
Query 27858 ACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAA 27912
|| |||| |||||| ||||| |||||||||||| |||| || || |||
Sbjct 193702 ACCATCGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAA 193761
Query 27913 CGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATC 27972
| || || ||||| || ||||||||||| || | | | ||||| || ||||||||
Sbjct 193762 AGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATT 193821
Query 27973 CAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||| |||| | |||||||||||| | ||| | || ||
Sbjct 193822 CAAAAAGAATCCACTCTTCATTTGGTTTTGAGATTGAGAGGTGG 193865
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355862326269759
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |